RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OR52A4PA6NMU1 304 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF207O43670 478 aaKnown RBP8□□□□□ -1.13
COL6A6-201ENST00000358511 PIGPP57054 158 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 SLC48A1Q6P1K1 146 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 LYPD8Q6UX82 237 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CMTM2Q8TAZ6 248 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 PTP4A1Q93096 173 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 HGDQ93099 445 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MYOTQ9UBF9 498 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 DNAJB11Q9UBS4 358 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 ZC3H12DA2A288 527 aaKnown RBP8□□□□□ -1.13
COL6A6-201ENST00000358511 RBP2P50120 134 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 SRYQ05066 204 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 ETFDHQ16134 617 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 LCN15Q6UWW0 184 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 PLXDC2Q6UX71 529 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MISPQ8IVT2 679 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MMP21Q8N119 569 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CCNL2Q96S94 520 aaPredicted RBP8□□□□□ -1.13
COL6A6-201ENST00000358511 GPR62Q9BZJ7 368 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 TRAPPC2LQ9UL33 140 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 GLSO94925 669 aaPredicted RBP8□□□□□ -1.13
COL6A6-201ENST00000358511 WNT1P04628 370 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CTXN2P0C2S0 81 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 TRILQ7L0X0 811 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 RBMXL3Q8N7X1 1067 aaKnown RBP8□□□□□ -1.13
COL6A6-201ENST00000358511 NHLRC2Q8NBF2 726 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 SLC38A9Q8NBW4 561 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 SLC35A4Q96G79 324 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 HSD17B6O14756 317 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MANEAQ5SRI9 462 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 LANCL3Q6ZV70 420 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CBLN2Q8IUK8 224 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MUC20Q8N307 709 aaPredicted RBP8□□□□□ -1.13
COL6A6-201ENST00000358511 GPR87Q9BY21 358 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 PLPP1O14494 284 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 RGRP47804 291 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CARD18P57730 90 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CPEB4Q17RY0 729 aaKnown RBP eCLIP8□□□□□ -1.13
COL6A6-201ENST00000358511 TIGITQ495A1 244 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 FAM27D1Q5T7N8 215 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 OVCH2Q7RTZ1 564 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CPEB2Q7Z5Q1 589 aaKnown RBP8□□□□□ -1.13
COL6A6-201ENST00000358511 CLDND1Q9NY35 253 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 APOBEC3BQ9UH17 382 aaKnown RBP8□□□□□ -1.13
COL6A6-201ENST00000358511 MED16Q9Y2X0 877 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 V9GYH0 126 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 DVL1O14640 695 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MPGP29372 298 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 PLAC9Q5JTB6 97 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF852Q6ZMS4 543 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MOB3CQ70IA8 216 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 DTWD2Q8NBA8 298 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MARCH1Q8TCQ1 289 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 TAAR9Q96RI9 348 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CTDSP1Q9GZU7 261 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF816-ZNF321PA0A0X1KG74 233 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 GALR3O60755 368 aaPredicted RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CTNSO60931 367 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 ACVR1Q04771 509 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 DEFB110Q30KQ9 67 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 CALHM3Q86XJ0 350 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 LINC00346Q8IVM7 164 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 ARRDC1Q8N5I2 433 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF321PQ8N8H1 164 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 TMEM40Q8WWA1 233 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 GPR137Q96N19 417 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 TIMM29Q9BSF4 260 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 EPHX3Q9H6B9 360 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 SIRT3Q9NTG7 399 aaPredicted RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 LPAR3Q9UBY5 353 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 YTHDF2Q9Y5A9 579 aaKnown RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 SLC2A10O95528 541 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 COX5AP20674 150 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 DIO1P49895 249 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 SSX1Q16384 188 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 PTOV1Q86YD1 416 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 PTPRZ1P23471 2315 aaPredicted RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 FCER1GP30273 86 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 PGBD5Q8N414 524 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 SNX22Q96L94 193 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 WSB1Q9Y6I7 421 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 TMEM218A2RU14 115 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 EDN1P05305 212 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 APEHP13798 732 aaKnown RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 UBE2G1P62253 170 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 HSF5Q4G112 596 aaPredicted RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 H2BFWTQ7Z2G1 175 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 TCTEX1D1Q8N7M0 179 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF250P15622 560 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF25P17030 456 aaPredicted RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 PNRC1Q12796 327 aaPredicted RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 NUDT8Q8WV74 236 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 MR1Q95460 341 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 SPOCK3Q9BQ16 436 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 RSRP1Q9BUV0 290 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 NOTCH3Q9UM47 2321 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 HBQ1P09105 142 aa7.99□□□□□ -1.13
COL6A6-201ENST00000358511 GSTP1P09211 210 aaKnown RBP7.99□□□□□ -1.13
COL6A6-201ENST00000358511 C1SP09871 688 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms