RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 OR2C1O95371 312 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 QDPRP09417 244 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 IGHV3-43DP0DP04 118 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 ACAA2P42765 397 aaKnown RBP8.9□□□□□ -0.98
CHD3-202ENST00000358181 HAAOP46952 286 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 ERVFC1P60507 584 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 ERVPABLB-1P60509 514 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 CLN3Q13286 438 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 SCD5Q86SK9 330 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 MAML2Q8IZL2 1156 aaPredicted RBP8.9□□□□□ -0.98
CHD3-202ENST00000358181 OR5D13Q8NGL4 314 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 OR1N2Q8NGR9 330 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 INSM2Q96T92 566 aaPredicted RBP8.9□□□□□ -0.98
CHD3-202ENST00000358181 SLC46A2Q9BY10 475 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 TAF9BQ9HBM6 251 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 LTB4R2Q9NPC1 389 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 USP22Q9UPT9 525 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 NUP188Q5SRE5 1749 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 A1L4Q6 167 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 C3orf80F5H4A9 247 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 PPP3CBP16298 524 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 GUK1Q16774 197 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 DUSP6Q16828 381 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 ACTBL2Q562R1 376 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 SOHLH1Q5JUK2 328 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 RFLNAQ6ZTI6 216 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 RAB37Q96AX2 223 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 GDE1Q9NZC3 331 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 ORM1P02763 201 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 PRSS1P07477 247 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 ACP2P11117 423 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 DCAF7P61962 342 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 D2HGDHQ8N465 521 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 PRSS3P2Q8NHM4 247 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 C7orf43Q8WVR3 580 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 FLYWCH2Q96CP2 140 aaKnown RBP8.9□□□□□ -0.99
CHD3-202ENST00000358181 PCGF1Q9BSM1 259 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 ACTR3CQ9C0K3 210 aaPredicted RBP8.9□□□□□ -0.99
CHD3-202ENST00000358181 POLDIP2Q9Y2S7 368 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 C5P01031 1676 aa8.9□□□□□ -0.99
CHD3-202ENST00000358181 TRAV36DV7A0A075B6V5 113 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CCDC187A0A096LP49 1063 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 IGHV3-21A0A0B4J1V1 117 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 PDGFBP01127 241 aaPredicted RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 RELBQ01201 579 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 NFATC3Q12968 1075 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 UBE2DNLQ8IWF7 75 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 YTHDF1Q9BYJ9 559 aaKnown RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 TAAR3PQ9P1P4 343 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 LOXHD1Q8IVV2 1947 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CHRM2P08172 466 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 ZNF266Q14584 549 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CYHR1Q6ZMK1 362 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 ANGPTL5Q86XS5 388 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 OR13H1Q8NG92 308 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 RSG1Q9BU20 258 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 SMOC1Q9H4F8 434 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CNR1P21554 472 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 SUOXP51687 545 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 TMEM267Q0VDI3 215 aaPredicted RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 FNDC7Q5VTL7 733 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 TDHQ8IZJ6 230 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 PACRGLQ8N7B6 248 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 TMED6Q8WW62 240 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 AQP10Q96PS8 301 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 ARHGDIGQ99819 225 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CABLES2Q9BTV7 478 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 MAGT1Q9H0U3 335 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 WDR13Q9H1Z4 485 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CBR3O75828 277 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CRYABP02511 175 aaKnown RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 PRF1P14222 555 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 SDHBP21912 280 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 NKX2-1P43699 371 aaPredicted RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 RAB32Q13637 225 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 LETMD1Q6P1Q0 360 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 RETREG3Q86VR2 466 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 LGI3Q8N145 548 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 OR13C6PQ8NH95 151 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 SPACA5Q96QH8 159 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 TNFRSF13CQ96RJ3 184 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 OR5V1Q9UGF6 321 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 SDHDO14521 159 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 EEDO75530 441 aaKnown RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 ZNF133P52736 654 aaPredicted RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 EMP1P54849 157 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 MRPS21P82921 87 aaKnown RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 FAM3AP98173 230 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 PDCD1Q15116 288 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 ZNF766Q5HY98 468 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 GPR26Q8NDV2 337 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 FBXL17Q9UF56 701 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 BOLA1Q9Y3E2 137 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CEPT1Q9Y6K0 416 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 A0A1W2PNV4 684 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 CPN1P15169 458 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 HLA-GP17693 338 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 GFRA1P56159 465 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 SRSF9Q13242 221 aaKnown RBP eCLIP8.89□□□□□ -0.99
CHD3-202ENST00000358181 PM20D1Q6GTS8 502 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms