RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 HHLA2Q9UM44 414 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 MRPS33Q9Y291 106 aaKnown RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 MRPS18BQ9Y676 258 aaKnown RBP9.53□□□□□ -0.88
CAPN3-205ENST00000357568 XIRP2A4UGR9 3374 aa9.53□□□□□ -0.88
CAPN3-205ENST00000357568 EML5Q05BV3 1969 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 OR2W5A6NFC9 320 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 DCTN6O00399 190 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 CST4P01036 141 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 DRD3P35462 400 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 RIDAP52758 137 aaKnown RBP9.52□□□□□ -0.88
CAPN3-205ENST00000357568 IL15RAQ13261 267 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 FAM53BQ14153 422 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 TCEA2Q15560 299 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 MEP1BQ16820 701 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 TMEM268Q5VZI3 342 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 HIST2H3AQ71DI3 136 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 PLPP7Q8NBV4 271 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 EDARADDQ8WWZ3 215 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 WNT2BQ93097 391 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 ZNF285Q96NJ3 590 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 CLCC1Q96S66 551 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 LPAR4Q99677 370 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 ULBP3Q9BZM4 244 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 HRH4Q9H3N8 390 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 TREM2Q9NZC2 230 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 GHRLQ9UBU3 117 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 MEMO1Q9Y316 297 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 STARD10Q9Y365 291 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 FAM96BQ9Y3D0 163 aa9.52□□□□□ -0.88
CAPN3-205ENST00000357568 TMEM235A6NFC5 223 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-205ENST00000357568 SRSF10O75494 262 aaKnown RBP9.52□□□□□ -0.89
CAPN3-205ENST00000357568 IFNA6P05013 189 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 HOXC4P09017 264 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-205ENST00000357568 ZNF14P17017 642 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-205ENST00000357568 RAB5AP20339 215 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 VAMP1P23763 118 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 CPT2P23786 658 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 HSD11B1P28845 292 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 PPT1P50897 306 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 CD81P60033 236 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 BTG2P78543 158 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 RPL18Q07020 188 aaKnown RBP9.52□□□□□ -0.89
CAPN3-205ENST00000357568 KLHL26Q53HC5 615 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 FNDC7Q5VTL7 733 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 DHRS11Q6UWP2 260 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 RHOUQ7L0Q8 258 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 KCTD9Q7L273 389 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 WDSUB1Q8N9V3 476 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 TMEM52Q8NDY8 209 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 RERGQ96A58 199 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-205ENST00000357568 SLC25A44Q96H78 314 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-205ENST00000357568 C2orf50Q96LR7 162 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 ZFYVE21Q9BQ24 234 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 PAPOLGQ9BWT3 736 aaKnown RBP9.52□□□□□ -0.89
CAPN3-205ENST00000357568 C5orf42Q9H799 3197 aa9.52□□□□□ -0.89
CAPN3-205ENST00000357568 TBC1D3DA0A087WVF3 549 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 ZNF860A6NHJ4 632 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 TBC1D3LB9A6J9 549 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 OR8U8P0C7N1 319 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 TBC1D3HP0C7X1 549 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 SFTPCP11686 197 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 LPAR6P43657 344 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 ADPRHP54922 357 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 ACTR1AP61163 376 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 IGLV3-21P80748 117 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-205ENST00000357568 FAM3AP98173 230 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 ELAVL1Q15717 326 aaKnown RBP9.51□□□□□ -0.89
CAPN3-205ENST00000357568 FAM189A2Q15884 450 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 C21orf62-AS1Q17RA5 79 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 GXYLT1Q4G148 440 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 TBC1D3CQ6IPX1 549 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 FIGLAQ6QHK4 219 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 RNF44Q7L0R7 432 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 PEG10Q86TG7 708 aaKnown RBP9.51□□□□□ -0.89
CAPN3-205ENST00000357568 CACUL1Q86Y37 369 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 TBC1D3Q8IZP1 549 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-205ENST00000357568 C8orf44Q96CB5 159 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 CMKLR1Q99788 373 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 PCED1AQ9H1Q7 454 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 SRMSQ9H3Y6 488 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 SMDT1Q9H4I9 107 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 VSX1Q9NZR4 365 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-205ENST00000357568 GPR132Q9UNW8 380 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 FLVCR1Q9Y5Y0 555 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 R4GMQ9 66 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 OR10H2O60403 315 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 CLN5O75503 358 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 MED6O75586 246 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 JTBO76095 146 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 CHRM2P08172 466 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 SLC2A1P11166 492 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 FPR2P25090 351 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 DNASE1L1P49184 302 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 HSD17B7P56937 341 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 QRFPP83859 136 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 MOGAT2Q3SYC2 334 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 OPN5Q6U736 354 aa9.51□□□□□ -0.89
CAPN3-205ENST00000357568 NPSR1Q6W5P4 371 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms