RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ALG1L2C9J202 215 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 HRKO00198 91 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 FCGR2CP31995 323 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 G6PCP35575 357 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 MZT1Q08AG7 82 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF181Q2M3W8 571 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 PACRGLQ8N7B6 248 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 OR2G3Q8NGZ4 309 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 ZFAND1Q8TCF1 268 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 SLC25A31Q9H0C2 315 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 C20orf141Q9NUB4 165 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 ZMIZ1Q9ULJ6 1067 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 TIMM9Q9Y5J7 89 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-202ENST00000357409 CDK2AP1O14519 115 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 P2RX6O15547 441 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 RNASE1P07998 156 aaKnown RBP6.63□□□□□ -1.35
VPS13A-202ENST00000357409 ACKR3P25106 362 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 REEP5Q00765 189 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 PELI3Q8N2H9 469 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 OR52I2Q8NH67 350 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 ADAMTS17Q8TE56 1095 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 CT55Q8WUE5 264 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 UPRTQ96BW1 309 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 UBL7Q96S82 380 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-202ENST00000357409 IQGAP1P46940 1657 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 DBX1A6NMT0 343 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 D6RAR5 112 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 HMGN4O00479 90 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 HOXA9P31269 272 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 LIMK1P53667 647 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 HSD17B7P56937 341 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 DUOX1Q9NRD9 1551 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 GDF9O60383 454 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 CD14P08571 375 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 ZBTB37Q5TC79 503 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 NAA40Q86UY6 237 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 LRRC56Q8IYG6 542 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-202ENST00000357409 MRGPRDQ8TDS7 321 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 BMPR1BO00238 502 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 TGM6O95932 706 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 TPT1P13693 172 aaKnown RBP6.63□□□□□ -1.35
VPS13A-202ENST00000357409 PNLIPRP2P54317 469 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 MESP2Q0VG99 397 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 PROX2Q3B8N5 592 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 OR4A4PQ8NGN8 299 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 MITD1Q8WV92 249 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 TMEM204Q9BSN7 226 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 YTHDF1Q9BYJ9 559 aaKnown RBP6.63□□□□□ -1.35
VPS13A-202ENST00000357409 KLK11Q9UBX7 282 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 NAP1L6A6NFF2 107 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 TSPAN12O95859 305 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 CD40P25942 277 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 TAS2R19P59542 299 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 GRINAQ7Z429 371 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 FBXO8Q9NRD0 319 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 IGHV3-23P01764 117 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 CEACAM6P40199 344 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 SUOXP51687 545 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 FCN2Q15485 313 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 SFXN4Q6P4A7 337 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 PLEKHF2Q9H8W4 249 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 SLC2A9Q9NRM0 540 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 ST3GAL6Q9Y274 331 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 LIPGQ9Y5X9 500 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 C1QCP02747 245 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 PRPH2P23942 346 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 KIR2DL3P43628 341 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 TNFAIP6P98066 277 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-202ENST00000357409 LRRTM1Q86UE6 522 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 OR10AC1Q8NH08 325 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 DEFB104AQ8WTQ1 72 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 MS4A3Q96HJ5 214 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 MS4A10Q96PG2 267 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 TMEM235A6NFC5 223 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 FAM189A1O60320 539 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 GFRA3O60609 400 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 EIF1BO60739 113 aaKnown RBP6.62□□□□□ -1.35
VPS13A-202ENST00000357409 UBE2G1P62253 170 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 GUCA2BQ16661 112 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 OR52H1Q8NGJ2 320 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 TMEM43Q9BTV4 400 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 NECAP2Q9NVZ3 263 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 HTR4Q13639 388 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 CYHR1Q6ZMK1 362 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 WDR5BQ86VZ2 330 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 CCDC28AQ8IWP9 274 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 L3MBTL4Q8NA19 623 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 ABHD3Q8WU67 409 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 APH1BQ8WW43 257 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF488Q96MN9 340 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 DPH3P1Q9H4G8 78 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 C19orf12Q9NSK7 152 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 C17orf112F2Z3M2 114 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 SULT1C4O75897 302 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 GLCEO94923 617 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 IGHV3-48P01763 117 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 RAB5BP61020 215 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 ELAVL1Q15717 326 aaKnown RBP6.62□□□□□ -1.35
VPS13A-202ENST00000357409 CBLN3Q6UW01 205 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms