RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ASH2LQ9UBL3 628 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 MEX3AA1L020 520 aaKnown RBP10.18□□□□□ -0.78
CAPN9-202ENST00000354537 ZNF705EA8MWA4 302 aaPredicted RBP10.18□□□□□ -0.78
CAPN9-202ENST00000354537 TSPAN2O60636 221 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 PLGP00747 810 aaPredicted RBP10.18□□□□□ -0.78
CAPN9-202ENST00000354537 S100A8P05109 93 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 CD5P06127 495 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 FPR2P25090 351 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 RAB5BP61020 215 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 SRSF3P84103 164 aaKnown RBP10.18□□□□□ -0.78
CAPN9-202ENST00000354537 RNF212Q495C1 297 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 OR52W1Q6IF63 320 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 SPRED2Q7Z698 418 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 TMEM151BQ8IW70 566 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 NUBPLQ8TB37 319 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 MARCH1Q8TCQ1 289 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 TMED6Q8WW62 240 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 FGGYQ96C11 551 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 C2orf50Q96LR7 162 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 SLC7A5P2Q9GIP4 190 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 SEC61A2Q9H9S3 476 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 PDE7BQ9NP56 450 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 SMCO4Q9NRQ5 59 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 ZMAT5Q9UDW3 170 aaKnown RBP10.18□□□□□ -0.78
CAPN9-202ENST00000354537 PISDQ9UG56 409 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 FLVCR1Q9Y5Y0 555 aa10.18□□□□□ -0.78
CAPN9-202ENST00000354537 RNASEK-C17orf49H0YIS7 233 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 MFNGO00587 321 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 AHSA1O95433 338 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 CSTBP04080 98 aaKnown RBP10.17□□□□□ -0.78
CAPN9-202ENST00000354537 H2BFMP0C1H6 154 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 SPP1P10451 314 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 IL12BP29460 328 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 DAP3P51398 398 aaKnown RBP10.17□□□□□ -0.78
CAPN9-202ENST00000354537 AKR1C2P52895 323 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 AKR1C1Q04828 323 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 IL15RAQ13261 267 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 PEA15Q15121 130 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 OR7A5Q15622 319 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 ZNF585AQ6P3V2 769 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 DCXRQ7Z4W1 244 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 NAA40Q86UY6 237 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.17□□□□□ -0.78
CAPN9-202ENST00000354537 RXFP4Q8TDU9 374 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 MRGPRX1Q96LB2 322 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 NKX3-1Q99801 234 aaPredicted RBP10.17□□□□□ -0.78
CAPN9-202ENST00000354537 KLHDC3Q9BQ90 382 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 OCSTAMPQ9BR26 566 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 SLC5A7Q9GZV3 580 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 LANCL2Q9NS86 450 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 FAM206AQ9NX38 181 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 FANCMQ8IYD8 2048 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 COLCA2A8K830 154 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 TMEM150CB9EJG8 249 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 P2RY10O00398 339 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 SMAD9O15198 467 aaKnown RBP10.17□□□□□ -0.78
CAPN9-202ENST00000354537 MBTPS2O43462 519 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 EIF3IQ13347 325 aaKnown RBP10.17□□□□□ -0.78
CAPN9-202ENST00000354537 GFOD2Q3B7J2 385 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 MISPQ8IVT2 679 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 OR52N4Q8NGI2 321 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 RHBDD1Q8TEB9 315 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 ZNF721Q8TF20 911 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 NKD1Q969G9 470 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 FOXN4Q96NZ1 517 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 SLC26A1Q9H2B4 701 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 MOB1AQ9H8S9 216 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 UCK1Q9HA47 277 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 PARP11Q9NR21 331 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 SRPK3Q9UPE1 567 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 MEMO1Q9Y316 297 aa10.17□□□□□ -0.78
CAPN9-202ENST00000354537 IGKV3D-11A0A0A0MRZ8 115 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 FIGNL2A6NMB9 653 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 FTCDNL1E5RQL4 147 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 PRAMEF26H0Y7S4 382 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 DDAH2O95865 285 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 PMP2P02689 132 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 SMIM6P0DI80 62 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 ABCD3P28288 659 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 CD1CP29017 333 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 SULT1A2P50226 295 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 SURF2Q15527 256 aaPredicted RBP10.16□□□□□ -0.78
CAPN9-202ENST00000354537 KLHL24Q6TFL4 600 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 BTNL8Q6UX41 500 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 Q7L0L9 218 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 MARCH3Q86UD3 253 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 OR13H1Q8NG92 308 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 GPR119Q8TDV5 335 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 ASB10Q8WXI3 467 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 TMEM230Q96A57 120 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 CMBLQ96DG6 245 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 NECAB3Q96P71 396 aaPredicted RBP10.16□□□□□ -0.78
CAPN9-202ENST00000354537 MICU1Q9BPX6 476 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 ADAT1Q9BUB4 502 aaKnown RBP10.16□□□□□ -0.78
CAPN9-202ENST00000354537 TBL1XR1Q9BZK7 514 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 RTN4RQ9BZR6 473 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 C5orf66Q9H5L9 145 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 LOC100509620A0A075B734 347 aa10.16□□□□□ -0.78
CAPN9-202ENST00000354537 OR2W5A6NFC9 320 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms