RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RGS6P49758 472 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 COX10Q12887 443 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 TRAP1Q12931 704 aaKnown RBP13.25□□□□□ -0.29
PDGFA-201ENST00000354513 BAMBIQ13145 260 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 ZNF181Q2M3W8 571 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 ZNF404Q494X3 552 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 SHISA2Q6UWI4 295 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 CYP2R1Q6VVX0 501 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 FKBP9P1Q75LS8 142 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 ADCK1Q86TW2 530 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 MOGAT3Q86VF5 341 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 ATG16L2Q8NAA4 619 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 BHLHE23Q8NDY6 225 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 UNKLQ9H9P5 680 aaKnown RBP13.25□□□□□ -0.29
PDGFA-201ENST00000354513 PNRC2Q9NPJ4 139 aaKnown RBP13.25□□□□□ -0.29
PDGFA-201ENST00000354513 RPS6KA6Q9UK32 745 aa13.25□□□□□ -0.29
PDGFA-201ENST00000354513 TRAV40A0A0B4J280 105 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 CLDN34H7C241 214 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 ACOT8O14734 319 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 RRP9O43818 475 aaKnown RBP13.24□□□□□ -0.29
PDGFA-201ENST00000354513 CIB2O75838 187 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 SEMG1P04279 462 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 PPIAL4GP0DN37 164 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 ATP6V1B2P21281 511 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 RAD23AP54725 363 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 MAB21L1Q13394 359 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 FGD3Q5JSP0 725 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 LCN8Q6JVE9 175 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 LEG1Q6P5S2 330 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 LYPD2Q6UXB3 125 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 DPY19L2P2Q6ZN68 376 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.24□□□□□ -0.29
PDGFA-201ENST00000354513 SLC26A10Q8NG04 563 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 OR13G1Q8NGZ3 307 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 UTP4Q969X6 686 aaKnown RBP13.24□□□□□ -0.29
PDGFA-201ENST00000354513 APOBEC3DQ96AK3 386 aaPredicted RBP13.24□□□□□ -0.29
PDGFA-201ENST00000354513 LRGUKQ96M69 825 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 TRIM15Q9C019 465 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 HDHD2Q9H0R4 259 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 DCAF13Q9NV06 445 aaKnown RBP13.24□□□□□ -0.29
PDGFA-201ENST00000354513 B9D1Q9UPM9 204 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 POMPQ9Y244 141 aa13.24□□□□□ -0.29
PDGFA-201ENST00000354513 UNC119BA6NIH7 251 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 IFNL4K9M1U5 179 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 FSTL3O95633 263 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 HLA-DPB1P04440 258 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 PSKH1P11801 424 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 FLOT2Q14254 428 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 CLEC12AQ5QGZ9 265 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 SLC18B1Q6NT16 456 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 RBMS3Q6XE24 437 aaKnown RBP13.23□□□□□ -0.29
PDGFA-201ENST00000354513 ZNF841Q6ZN19 808 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 NAA40Q86UY6 237 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 CYP4Z1Q86W10 505 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 LINC00346Q8IVM7 164 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 OR6V1Q8N148 313 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 C19orf18Q8NEA5 215 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 OR52E2Q8NGJ4 325 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 NEIL1Q96FI4 390 aaPredicted RBP13.23□□□□□ -0.29
PDGFA-201ENST00000354513 RAB3IPQ96QF0 476 aaPredicted RBP13.23□□□□□ -0.29
PDGFA-201ENST00000354513 CDADC1Q9BWV3 514 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 FN3KQ9H479 309 aa13.23□□□□□ -0.29
PDGFA-201ENST00000354513 SAMD4AQ9UPU9 718 aaKnown RBP13.23□□□□□ -0.29
PDGFA-201ENST00000354513 PRKDCP78527 4128 aaKnown RBP13.22□□□□□ -0.29
PDGFA-201ENST00000354513 RHCEP18577 417 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 GATA4P43694 442 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 SRP9P49458 86 aaKnown RBP13.22□□□□□ -0.29
PDGFA-201ENST00000354513 GNB2P62879 340 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 GK2Q14410 553 aaPredicted RBP13.22□□□□□ -0.29
PDGFA-201ENST00000354513 C1orf146Q5VVC0 180 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 SLC27A4Q6P1M0 643 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 SMARCD3Q6STE5 483 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 RRM2BQ7LG56 351 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 GJC3Q8NFK1 279 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 RAB40AQ8WXH6 277 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 ZNF582Q96NG8 517 aaPredicted RBP13.22□□□□□ -0.29
PDGFA-201ENST00000354513 NMNAT3Q96T66 252 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 NDEL1Q9GZM8 345 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 MS4A7Q9GZW8 240 aaPredicted RBP13.22□□□□□ -0.29
PDGFA-201ENST00000354513 OR52D1Q9H346 318 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 CTSZQ9UBR2 303 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 MIOXQ9UGB7 285 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 POLR1DQ9Y2S0 133 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 V9GYQ6 96 aa13.22□□□□□ -0.29
PDGFA-201ENST00000354513 KIR2DS1A0A191URI9 304 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 C5orf63A6NC05 138 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 C22orf46C9J442 243 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 FCN3O75636 299 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 HIST1H1CP16403 213 aaKnown RBP13.21□□□□□ -0.29
PDGFA-201ENST00000354513 MDKP21741 143 aaPredicted RBP13.21□□□□□ -0.29
PDGFA-201ENST00000354513 CPT2P23786 658 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 GGT2P36268 569 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 RPS6KA3P51812 740 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 PRAMEF6Q5VXH4 476 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 LRRN1Q6UXK5 716 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 BRD3OSQ6XYD6 125 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 ZBTB46Q86UZ6 589 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 OR5L1Q8NGL2 311 aa13.21□□□□□ -0.29
PDGFA-201ENST00000354513 OR10S1Q8NGN2 331 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms