RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 A0A0G2JMZ2 1700 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 LRRC37A2A6NM11 1700 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 PLPP3O14495 311 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 TSPAN4O14817 238 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 PSMB1P20618 241 aaKnown RBP12.28□□□□□ -0.44
SMC6-201ENST00000351948 RELAQ04206 551 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 SLC25A35Q3KQZ1 300 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 ZNF468Q5VIY5 522 aaPredicted RBP12.28□□□□□ -0.44
SMC6-201ENST00000351948 GDPD3Q7L5L3 318 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 OR52H1Q8NGJ2 320 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 LRFN5Q96NI6 719 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 B3GAT1Q9P2W7 334 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
SMC6-201ENST00000351948 SULT1C4O75897 302 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 ZNF32P17041 273 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 TAS2R31P59538 309 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 PMP22Q01453 160 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 GSG1Q2KHT4 349 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 STAC2Q6ZMT1 411 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 TMEM105Q8N8V8 129 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 OR52I2Q8NH67 350 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 SLC22A23A1A5C7 686 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 SDCBPO00560 298 aaPredicted RBP12.27□□□□□ -0.44
SMC6-201ENST00000351948 SSX5O60225 188 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 IFNA17P01571 189 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 DGCR2P98153 550 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 FGL1Q08830 312 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 AQP6Q13520 282 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 FOXB2Q5VYV0 432 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 OR4D6Q8NGJ1 314 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 ABHD3Q8WU67 409 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 FGF20Q9NP95 211 aaPredicted RBP12.27□□□□□ -0.44
SMC6-201ENST00000351948 TAS2R3Q9NYW6 316 aa12.27□□□□□ -0.44
SMC6-201ENST00000351948 PRSS23O95084 383 aa12.27□□□□□ -0.45
SMC6-201ENST00000351948 JMJD6Q6NYC1 403 aaPredicted RBP12.27□□□□□ -0.45
SMC6-201ENST00000351948 ZNF808Q8N4W9 903 aaPredicted RBP12.27□□□□□ -0.45
SMC6-201ENST00000351948 BARHL1Q9BZE3 327 aa12.27□□□□□ -0.45
SMC6-201ENST00000351948 OR6C6A6NF89 314 aa12.27□□□□□ -0.45
SMC6-201ENST00000351948 LRRC30A6NM36 301 aa12.27□□□□□ -0.45
SMC6-201ENST00000351948 HMGA2P52926 109 aa12.27□□□□□ -0.45
SMC6-201ENST00000351948 ADGRG3Q86Y34 549 aa12.27□□□□□ -0.45
SMC6-201ENST00000351948 PHYHIPQ92561 330 aa12.27□□□□□ -0.45
SMC6-201ENST00000351948 SPRY3O43610 288 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 S100A1P23297 94 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 OMGP23515 440 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 RAD52P43351 418 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 OR8B4Q96RC9 309 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 AIFM2Q9BRQ8 373 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 EGLN1Q9GZT9 426 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 GFRA3O60609 400 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ATG12O94817 140 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 EFEMP2O95967 443 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 PNLIPP16233 465 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 AGTR1P30556 359 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 SKP2Q13309 424 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 DOC2BQ14184 412 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ZMYND11Q15326 602 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 RBMS2Q15434 407 aaKnown RBP12.26□□□□□ -0.45
SMC6-201ENST00000351948 C2orf76Q3KRA6 126 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ATG4DQ86TL0 474 aaPredicted RBP12.26□□□□□ -0.45
SMC6-201ENST00000351948 TUSC5Q8IXB3 177 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 OR51S1Q8NGJ8 323 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 OR1F12Q8NHA8 337 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 SDSLQ96GA7 329 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 FCRL1Q96LA6 429 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ZNF416Q9BWM5 594 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 NELFAQ9H3P2 528 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 AKIRIN1Q9H9L7 192 aaPredicted RBP12.26□□□□□ -0.45
SMC6-201ENST00000351948 IL17BQ9UHF5 180 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 CEBPZOSA8MTT3 80 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 GLRA1P23415 457 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ZNF136P52737 540 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 OR2T2Q6IF00 324 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 DMBX1Q8NFW5 382 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 OR56B4Q8NH76 319 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 UBALD1Q8TB05 177 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 PELI1Q96FA3 418 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 MFFQ9GZY8 342 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 METTL17Q9H7H0 456 aaPredicted RBP12.26□□□□□ -0.45
SMC6-201ENST00000351948 TP53TG5Q9Y2B4 290 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ZFC3H1O60293 1989 aaKnown RBP12.26□□□□□ -0.45
SMC6-201ENST00000351948 S100A6P06703 90 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 GNB3P16520 340 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 SELENOPP49908 381 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 PABPC1L2AQ5JQF8 200 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ELP2Q6IA86 826 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ZFAND1Q8TCF1 268 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 BCO1Q9HAY6 547 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 RAB9BQ9NP90 201 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 FBXO8Q9NRD0 319 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 ETV7Q9Y603 341 aa12.26□□□□□ -0.45
SMC6-201ENST00000351948 IFITM5A6NNB3 132 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 HSD17B6O14756 317 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 GPM6AP51674 278 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ZNF718Q3SXZ3 478 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 WDR38Q5JTN6 314 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 OR51H1Q8NH63 302 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 PLPPR2Q96GM1 343 aa12.25□□□□□ -0.45
SMC6-201ENST00000351948 ZNF764Q96H86 408 aaPredicted RBP12.25□□□□□ -0.45
SMC6-201ENST00000351948 USB1Q9BQ65 265 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms