RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 EXTL2Q9UBQ6 330 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 GVINP1Q7Z2Y8 2422 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 TRAV8-7A0A075B6U6 113 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 TRBV5-7A0A0A0MS05 114 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 A0A0G2JMP0 313 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 A0A0X1KG70 313 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 PCP4L1A6NKN8 68 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 SRSF10O75494 262 aaKnown RBP8.16□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF205O95201 554 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 PTTG1O95997 202 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 ADRA2CP18825 462 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 CLDN15P56746 228 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 DEFA1P59665 94 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 DEFA3P59666 94 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 STAC2Q6ZMT1 411 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 C22orf34Q6ZV56 151 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 VASH2Q86V25 355 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 DTX1Q86Y01 620 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 DNAAF1Q8NEP3 725 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 OR2M7Q8NG81 312 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 OR4M2Q8NGB6 313 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 OR9K2Q8NGE7 335 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 GPR148Q8TDV2 347 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 KIAA1143Q96AT1 154 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-202ENST00000345734 NAA11Q9BSU3 229 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-202ENST00000345734 WACQ9BTA9 647 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 CYSLTR2Q9NS75 346 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 PAQR5Q9NXK6 330 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-202ENST00000345734 CYB5R1Q9UHQ9 305 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 LHFPL6Q9Y693 200 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 AKAP13Q12802 2813 aa8.16□□□□□ -1.1
ATG4A-202ENST00000345734 TMEM82A0PJX8 343 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 GJE1A6NN92 205 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 CENPXA8MT69 81 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 CDRT15L2A8MXV6 281 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 NPIPA2E9PIF3 369 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 NPIPA3F8WFD2 350 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 GPR171O14626 319 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 SMAD9O15198 467 aaKnown RBP8.15□□□□□ -1.1
ATG4A-202ENST00000345734 NPR2P20594 1047 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 RBMS1P29558 406 aaKnown RBP8.15□□□□□ -1.1
ATG4A-202ENST00000345734 CASRP41180 1078 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 CCR9P51686 369 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 AGFG1P52594 562 aaKnown RBP8.15□□□□□ -1.1
ATG4A-202ENST00000345734 NKX2-5P52952 324 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-202ENST00000345734 CLDN12P56749 244 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 CD83Q01151 205 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 METAP1DQ6UB28 335 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-202ENST00000345734 CFAP77Q6ZQR2 320 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF767PQ75MW2 155 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 LRRTM1Q86UE6 522 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 LRRC28Q86X40 367 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-202ENST00000345734 Q8N402 240 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 ZIC4Q8N9L1 334 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 OR10S1Q8NGN2 331 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 LGALS14Q8TCE9 139 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 RNF133Q8WVZ7 376 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 TSEN15Q8WW01 171 aaKnown RBP8.15□□□□□ -1.1
ATG4A-202ENST00000345734 KCNE4Q8WWG9 221 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 TMEM106AQ96A25 262 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 SLAMF6Q96DU3 332 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 OR2M2Q96R28 347 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 FAM173AQ9BQD7 235 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 G6PC2Q9NQR9 355 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 BOKQ9UMX3 212 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-202ENST00000345734 R4GMQ9 66 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 CUL9Q8IWT3 2517 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 FAM186AA6NE01 2351 aa8.15□□□□□ -1.1
ATG4A-202ENST00000345734 ARGFXA6NJG6 315 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 PRSS44E7EML9 344 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 PDCD5O14737 125 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 CXCL13O43927 109 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF432O94892 652 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 VAMP5O95183 116 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 MAS1P04201 325 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 H2BFMP0C1H6 154 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 TRAPPC2P0DI81 140 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 TRAPPC2BP0DI82 140 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 MAPK3P27361 379 aaPredicted RBP8.15□□□□□ -1.11
ATG4A-202ENST00000345734 RFX2P48378 723 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 CSNK1A1P48729 337 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 SELENOPP49908 381 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ARHGDIBP52566 201 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 CARD18P57730 90 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 RAC3P60763 192 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ASPHD2Q6ICH7 369 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF544Q6NX49 715 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ESPNLQ6ZVH7 1005 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 NRARPQ7Z6K4 114 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 TMPRSS12Q86WS5 348 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 CLEC1AQ8NC01 280 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF671Q8TAW3 534 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ROBO4Q8WZ75 1007 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ADGRG7Q96K78 797 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 FER1L6-AS2Q96M78 137 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 IP6K3Q96PC2 410 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 NEDD4LQ96PU5 975 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 TMEM246Q9BRR3 403 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 TCF7L1Q9HCS4 588 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ASCL3Q9NQ33 180 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms