RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 WARS2Q9UGM6 360 aaKnown RBP13.18□□□□□ -0.3
TNFRSF12A-202ENST00000341627 PURGQ9UJV8 347 aaKnown RBP13.18□□□□□ -0.3
TNFRSF12A-202ENST00000341627 LY6HO94772 140 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ALOX5APP20292 161 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 KITLGP21583 273 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 HTR1FP30939 366 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 OPRL1P41146 370 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 PDLIM4P50479 330 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ZNF81P51508 661 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ELF3P78545 371 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 TMED1Q13445 227 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 LRRC36Q1X8D7 754 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 FBXW12Q6X9E4 464 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 DNM1P46Q6ZS02 220 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 NAA40Q86UY6 237 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ZNF525Q8N782 197 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 PACRGLQ8N7B6 248 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 FAM168AQ92567 244 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 AMELYQ99218 206 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 MNTQ99583 582 aa13.17□□□□□ -0.3
TNFRSF12A-202ENST00000341627 LOC100130705A0A1B0GUX0 176 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 E9PQ18 207 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 PHYHO14832 338 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SMAD7O15105 426 aaKnown RBP13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 MPZL2O60487 215 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 LY6G6DO95868 133 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 DAOP14920 347 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SELEP16581 610 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ATP6V1E1P36543 226 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 CX3CR1P49238 355 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 MMP15P51511 669 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SNRPGP62308 76 aaKnown RBP13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 POU4F2Q12837 409 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 TNK1Q13470 666 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 HLXQ14774 488 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 CARTPTQ16568 116 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 MEDAGQ5VYS4 303 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 LPCAT4Q643R3 524 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 MRPL21Q7Z2W9 205 aaKnown RBP13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 KRT77Q7Z794 578 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ZNF555Q8NEP9 628 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 UBASH3BQ8TF42 649 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ASB17Q8WXJ9 295 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ZNF582Q96NG8 517 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 NIPAL2Q9H841 368 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ADGRL4Q9HBW9 690 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 NKIRAS2Q9NYR9 191 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 DNAJC27Q9NZQ0 273 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ZDHHC8Q9ULC8 765 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 KLHDC2Q9Y2U9 406 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 TLN2Q9Y4G6 2542 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 NAV3Q8IVL0 2385 aa13.16□□□□□ -0.3
TNFRSF12A-202ENST00000341627 NSD1Q96L73 2696 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 LOC390937A0A1W2PQ73 354 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 NDUFS8O00217 210 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SLC16A6O15403 523 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 TPD52L2O43399 206 aaKnown RBP13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ANXA2P07355 339 aaKnown RBP13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SBK2P0C263 348 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SLC2A1P11166 492 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SLC25A16P16260 332 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 HOXB4P17483 251 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 PEX2P28328 305 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 HCCSP53701 268 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 TMEM255AQ5JRV8 349 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 FAM209AQ5JX71 171 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SLC25A30Q5SVS4 291 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 DEGS2Q6QHC5 323 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 CLEC9AQ6UXN8 241 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 PGAP1Q75T13 922 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 SLC35F2Q8IXU6 374 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 OR51G2Q8NGK0 314 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 MROQ9BYG7 248 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 DECR2Q9NUI1 292 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 FAM118AQ9NWS6 357 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
TNFRSF12A-202ENST00000341627 ZSCAN5BA6NJL1 495 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 ZNF670-ZNF695F2Z2N8 137 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 H0YHG0 523 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 CASQ2O14958 399 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 TBX1O43435 398 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 XRCC2O43543 280 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 SPRY3O43610 288 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 ZNF254O75437 659 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 HEXAP06865 529 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 MAGEB1P43366 347 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 GK2Q14410 553 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 OCLNQ16625 522 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 SNAI3Q3KNW1 292 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 OR2T2Q6IF00 324 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 LRRN1Q6UXK5 716 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 ZNF786Q8N393 782 aa13.14□□□□□ -0.31
TNFRSF12A-202ENST00000341627 ZNF540Q8NDQ6 660 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms