RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 MUC1P15941 1255 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM176BQ3YBM2 270 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 XKR7Q5GH72 579 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM123Q8N131 208 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 ACY3Q96HD9 319 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 GDF15Q99988 308 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SLC26A1Q9H2B4 701 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SIAH2O43255 324 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 NME2P1O60361 137 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 OR5AC1P0C628 307 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 SIRPB2Q5JXA9 342 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 UBE2NLQ5JXB2 153 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 HSD17B8Q92506 261 aa3.23□□□□□ -1.89
SYNE1-201ENST00000341594 RERGQ96A58 199 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-201ENST00000341594 LMX1BO60663 402 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 PRB2P02812 416 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-201ENST00000341594 EPHX1P07099 455 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 GNB3P16520 340 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 RASGEF1BQ0VAM2 473 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 SURF2Q15527 256 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM183BQ1AE95 376 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 KCNE4Q8WWG9 221 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ELOVL2Q9NXB9 296 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 CA14Q9ULX7 337 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 DNAJC15Q9Y5T4 150 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF511Q8NB15 262 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ST6GALNAC6Q969X2 333 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 CMKLR1Q99788 373 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 MFSD2BA6NFX1 497 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 MKRN2OSH3BPM6 223 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ADRA2CP18825 462 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TAS2R50P59544 299 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TAF9Q16594 264 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 CNIH2Q6PI25 160 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ASCL4Q6XD76 172 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 OR51T1Q8NGJ9 327 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 C12orf42Q96LP6 360 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TNFRSF13CQ96RJ3 184 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 LGR4Q9BXB1 951 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ZAR1LA6NP61 321 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 STC2O76061 302 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 AMD1P17707 334 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 BCKDHBP21953 392 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF273Q14593 569 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 RABEPKQ7Z6M1 372 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 NANOGP1Q8N7R0 232 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 RFXANKO14593 260 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 HIST1H2ABP04908 130 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 HIST3H2AQ7L7L0 130 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 REC114Q7Z4M0 266 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 OR4N2Q8NGD1 307 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 OR5D16Q8NGK9 328 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 OR2T35Q8NGX2 323 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 HIST1H2ACQ93077 130 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF430Q9H8G1 570 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-201ENST00000341594 CUTCQ9NTM9 273 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TEX10Q9NXF1 929 aaPredicted RBP3.22□□□□□ -1.89
SYNE1-201ENST00000341594 LINC00587B1AMM8 73 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 GPR171O14626 319 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 BMP7P18075 431 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 GABRR2P28476 465 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 RND3P61587 244 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 SAXO2Q658L1 398 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 CBLL1Q75N03 491 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ZDHHC22Q8N966 263 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM40Q8WWA1 233 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 FAM46AQ96IP4 442 aaKnown RBP3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TRIB1Q96RU8 372 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 DPH7Q9BTV6 452 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 OGG1O15527 345 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 SLC25A35Q3KQZ1 300 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF528Q3MIS6 628 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 LRRC18Q8N456 261 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 OR5AR1Q8NGP9 310 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 MRPL24Q96A35 216 aaKnown RBP3.22□□□□□ -1.89
SYNE1-201ENST00000341594 PNPLA2Q96AD5 504 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 FEVQ99581 238 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ALKBH6Q3KRA9 238 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM244Q5VVB8 128 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF417Q8TAU3 575 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TSSK2Q96PF2 358 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ZFYVE21Q9BQ24 234 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ALG12Q9BV10 488 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 COLEC10Q9Y6Z7 277 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ANKHD1Q8IWZ3 2542 aaKnown RBP3.22□□□□□ -1.89
SYNE1-201ENST00000341594 AKAIN1P0CW23 69 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 RAP1AP62834 184 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 SRSF3P84103 164 aaKnown RBP3.22□□□□□ -1.89
SYNE1-201ENST00000341594 LINC01559Q495D7 138 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 FA2HQ7L5A8 372 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TTC9BQ8N6N2 239 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 OR9K2Q8NGE7 335 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 OR6X1Q8NH79 312 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TWIST2Q8WVJ9 160 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 VAX2Q9UIW0 290 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 FITM1A5D6W6 292 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 ETFDHQ16134 617 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 SGK494Q96LW2 274 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM68Q96MH6 324 aa3.22□□□□□ -1.89
SYNE1-201ENST00000341594 SLC32A1Q9H598 525 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms