RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 SCN2AQ99250 2005 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 TRBV5-7A0A0A0MS05 114 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 ERCC1P07992 297 aaPredicted RBP13.76□□□□□ -0.21
LIMK2-203ENST00000340552 THEGLP0DJG4 465 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 AKR1C4P17516 323 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 TRA2BP62995 288 aaKnown RBP13.76□□□□□ -0.21
LIMK2-203ENST00000340552 BIKQ13323 160 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 EBPQ15125 230 aaKnown RBP13.76□□□□□ -0.21
LIMK2-203ENST00000340552 RHEBQ15382 184 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 DNLZQ5SXM8 178 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 HIST3H2BBQ8N257 126 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 FAM160A2Q8N612 972 aaPredicted RBP13.76□□□□□ -0.21
LIMK2-203ENST00000340552 ACOT4Q8N9L9 421 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 MFSD9Q8NBP5 474 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 OR6X1Q8NH79 312 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 ZNF563Q8TA94 476 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 GRHL3Q8TE85 626 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 NMNAT3Q96T66 252 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 ULBP3Q9BZM4 244 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 PARP12Q9H0J9 701 aaKnown RBP13.76□□□□□ -0.21
LIMK2-203ENST00000340552 KLHDC2Q9Y2U9 406 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 MMP24Q9Y5R2 645 aa13.76□□□□□ -0.21
LIMK2-203ENST00000340552 UMAD1C9J7I0 102 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 EIF1AYO14602 144 aaKnown RBP13.75□□□□□ -0.21
LIMK2-203ENST00000340552 OR2C1O95371 312 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 AK1P00568 194 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 CEACAM6P40199 344 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 EIF1AXP47813 144 aaKnown RBP13.75□□□□□ -0.21
LIMK2-203ENST00000340552 GPR18Q14330 331 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 ABHD17CQ6PCB6 329 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 OR2L5Q8NG80 312 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 GALNT14Q96FL9 552 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 STARD10Q9Y365 291 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 CBY1Q9Y3M2 126 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 SCN3AQ9NY46 2000 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 SPTY2D1-AS1A0A0U1RR47 76 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 LOC100289279A0A1B0GTE1 492 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 CRABP1P29762 137 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 SLC9A5Q14940 896 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 KIR2DS3Q14952 304 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 MRPL2Q5T653 305 aaKnown RBP13.75□□□□□ -0.21
LIMK2-203ENST00000340552 ACBD4Q8NC06 268 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 SEMA6DQ8NFY4 1073 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 OR10G6Q8NH81 332 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 ZNF417Q8TAU3 575 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 FAM174AQ8TBP5 190 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 AQP10Q96PS8 301 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 PTGES2Q9H7Z7 377 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 PRDM7Q9NQW5 492 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 FLVCR1Q9Y5Y0 555 aa13.75□□□□□ -0.21
LIMK2-203ENST00000340552 ARID1AO14497 2285 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 NPIPA5A0A0B4J1W7 369 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 NPIPA7E9PJI5 369 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 MKRN2OSH3BPM6 223 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 EFSO43281 561 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 DUS4LO95620 317 aaKnown RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 NGFRP08138 427 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 NPIPA8P0DM63 369 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H1TP22492 207 aaPredicted RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 ZNF385CQ66K41 422 aaPredicted RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 LYPD6BQ8NI32 183 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 FLVCR1-AS1Q8TAF5 88 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HLA-CQ95604 372 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 NTNG2Q96CW9 530 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 S100A13Q99584 98 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 MRM2Q9UI43 246 aaKnown RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 SLCO1B1Q9Y6L6 691 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HEATR5AQ86XA9 2040 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 A0A1W2PPC4 97 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BKO60814 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 AIFM1O95831 613 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BJP06899 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 CELA2BP08218 269 aaPredicted RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 CSNK2A2P19784 350 aaPredicted RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BOP23527 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 MPZP25189 248 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BBP33778 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BDP58876 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BCP62807 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 RAP1AP62834 184 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 ADAM8P78325 824 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 FZD2Q14332 565 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 RAB11BQ15907 218 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST2H2BEQ16778 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 EIPR1Q53HC9 387 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 PRSS54Q6PEW0 395 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 SFTPA2Q8IWL1 248 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 OR51F2Q8NH61 342 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BHQ93079 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 MVB12AQ96EY5 273 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BNQ99877 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 HIST1H2BMQ99879 126 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 UBQLN4Q9NRR5 601 aa13.74□□□□□ -0.21
LIMK2-203ENST00000340552 APOBEC3BQ9UH17 382 aaKnown RBP13.74□□□□□ -0.21
LIMK2-203ENST00000340552 EREGO14944 169 aa13.73□□□□□ -0.21
LIMK2-203ENST00000340552 GPANK1O95872 356 aa13.73□□□□□ -0.21
LIMK2-203ENST00000340552 TACR3P29371 465 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms