RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 FBLP22087 321 aaKnown RBP12.85□□□□□ -0.35
CPSF7-201ENST00000340437 HSD11B1P28845 292 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 CRABP1P29762 137 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 AIMP2Q13155 320 aaKnown RBP12.85□□□□□ -0.35
CPSF7-201ENST00000340437 IKZF1Q13422 519 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 ABHD12BQ7Z5M8 362 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-201ENST00000340437 LYG2Q86SG7 212 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 OR4K15Q8NH41 348 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 ADIPOR1Q96A54 375 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 CHMP1AQ9HD42 196 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-201ENST00000340437 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 POLEQ07864 2286 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 KNG1P01042 644 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 SFTPBP07988 381 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 HOXB5P09067 269 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF735P0CB33 412 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 CASRP41180 1078 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 MECP2P51608 486 aaKnown RBP12.85□□□□□ -0.35
CPSF7-201ENST00000340437 SRSF3P84103 164 aaKnown RBP12.85□□□□□ -0.35
CPSF7-201ENST00000340437 BHLHE23Q8NDY6 225 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 C2CD4CQ8TF44 421 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 FAM131CQ96AQ9 280 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 PRRT1Q99946 306 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 WWTR1Q9GZV5 400 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 TNFSF18Q9UNG2 199 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 FAM96BQ9Y3D0 163 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
CPSF7-201ENST00000340437 BCL2L11O43521 198 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 SLC26A5P58743 744 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 LPAL2Q16609 132 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 PDSS1Q5T2R2 415 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 DAZLQ92904 295 aaKnown RBP12.85□□□□□ -0.35
CPSF7-201ENST00000340437 KCNK7Q9Y2U2 307 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 DNAJC13O75165 2243 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 RNF222A6NCQ9 220 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 SFTPDP35247 375 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 MRPS21P82921 87 aaKnown RBP12.84□□□□□ -0.35
CPSF7-201ENST00000340437 FOXK1P85037 733 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 INPP5JQ15735 1006 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-201ENST00000340437 MPPED2Q15777 294 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 KCNRGQ8N5I3 272 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 CLEC1BQ9P126 229 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 GLS2Q9UI32 602 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 A0A1W2PNR3 127 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 MPTX1A8MV57 137 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 H7C2Y5 167 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 CRTAPO75718 401 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-201ENST00000340437 PPIAP62937 165 aaKnown RBP12.84□□□□□ -0.35
CPSF7-201ENST00000340437 TEX30Q5JUR7 227 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 FAM69BQ5VUD6 431 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 GLIPR1L1Q6UWM5 242 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 SLAMF6Q96DU3 332 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF304Q9HCX3 659 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 KLRF1Q9NZS2 232 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 MEGF11A6BM72 1044 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 WIPF3A6NGB9 483 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 RAB27BO00194 218 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 BET1O15155 118 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 VSIG8P0DPA2 414 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF93P35789 620 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-201ENST00000340437 PRSS12P56730 875 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 PAN3Q58A45 887 aaKnown RBP12.84□□□□□ -0.35
CPSF7-201ENST00000340437 TMEM244Q5VVB8 128 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF704Q6ZNC4 412 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-201ENST00000340437 TMEM104Q8NE00 496 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 OR1L3Q8NH93 324 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF519Q8TB69 540 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 LIPHQ8WWY8 451 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 C11orf40Q8WZ69 217 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 MMP17Q9ULZ9 603 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 SLC5A6Q9Y289 635 aa12.84□□□□□ -0.35
CPSF7-201ENST00000340437 OR6C76A6NM76 312 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 SOCS1O15524 211 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 GLI4P10075 376 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 FOLR1P15328 257 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 UNC119Q13432 240 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 PLEKHN1Q494U1 663 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF585AQ6P3V2 769 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 PELOQ9BRX2 385 aaKnown RBP12.83□□□□□ -0.36
CPSF7-201ENST00000340437 SMIM3Q9BZL3 60 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 G6PC2Q9NQR9 355 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF354AO60765 605 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-201ENST00000340437 BCKDHBP21953 392 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 NKAPLQ5M9Q1 402 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 GRINAQ7Z429 371 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 CLRN3Q8NCR9 226 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 FBXO24O75426 580 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 OR2F2O95006 317 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF205O95201 554 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 OR3A2P47893 321 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 OR2F1Q13607 317 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 ELAVL1Q15717 326 aaKnown RBP12.83□□□□□ -0.36
CPSF7-201ENST00000340437 DNM1P46Q6ZS02 220 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 OR1M1Q8NGA1 313 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 OR4K17Q8NGC6 315 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF775Q96BV0 537 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-201ENST00000340437 VN1R1Q9GZP7 353 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 PBOV1Q9GZY1 135 aa12.83□□□□□ -0.36
CPSF7-201ENST00000340437 RAB22AQ9UL26 194 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms