RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PPIAP62937 165 aaKnown RBP13.19□□□□□ -0.3
RET-201ENST00000340058 HAGHLQ6PII5 290 aaPredicted RBP13.19□□□□□ -0.3
RET-201ENST00000340058 GABRG1Q8N1C3 465 aa13.19□□□□□ -0.3
RET-201ENST00000340058 OR51A4Q8NGJ6 313 aa13.19□□□□□ -0.3
RET-201ENST00000340058 LILRB4Q8NHJ6 448 aa13.19□□□□□ -0.3
RET-201ENST00000340058 FANCFQ9NPI8 374 aa13.19□□□□□ -0.3
RET-201ENST00000340058 CUL9Q8IWT3 2517 aa13.19□□□□□ -0.3
RET-201ENST00000340058 PI4KAP42356 2102 aa13.19□□□□□ -0.3
RET-201ENST00000340058 ANKUB1A6NFN9 424 aa13.19□□□□□ -0.3
RET-201ENST00000340058 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
RET-201ENST00000340058 FADS1O60427 444 aa13.19□□□□□ -0.3
RET-201ENST00000340058 RAF1P04049 648 aa13.19□□□□□ -0.3
RET-201ENST00000340058 CCL2P13500 99 aa13.19□□□□□ -0.3
RET-201ENST00000340058 BDH1Q02338 343 aa13.19□□□□□ -0.3
RET-201ENST00000340058 FUT7Q11130 342 aa13.19□□□□□ -0.3
RET-201ENST00000340058 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
RET-201ENST00000340058 LINC00303Q3SY05 128 aa13.19□□□□□ -0.3
RET-201ENST00000340058 SPINK14Q6IE38 97 aa13.19□□□□□ -0.3
RET-201ENST00000340058 SNX18Q96RF0 628 aa13.19□□□□□ -0.3
RET-201ENST00000340058 PRSS27Q9BQR3 290 aa13.19□□□□□ -0.3
RET-201ENST00000340058 AICDAQ9GZX7 198 aa13.19□□□□□ -0.3
RET-201ENST00000340058 PLPP2O43688 288 aa13.19□□□□□ -0.3
RET-201ENST00000340058 IL2RGP31785 369 aa13.19□□□□□ -0.3
RET-201ENST00000340058 ETV6P41212 452 aa13.19□□□□□ -0.3
RET-201ENST00000340058 EGR3Q06889 387 aa13.19□□□□□ -0.3
RET-201ENST00000340058 DEFB109BQ30KR1 87 aa13.19□□□□□ -0.3
RET-201ENST00000340058 MESTQ5EB52 335 aa13.19□□□□□ -0.3
RET-201ENST00000340058 TMPRSS7Q7RTY8 843 aa13.19□□□□□ -0.3
RET-201ENST00000340058 OR1S1Q8NH92 325 aa13.19□□□□□ -0.3
RET-201ENST00000340058 TMEM9BQ9NQ34 198 aa13.19□□□□□ -0.3
RET-201ENST00000340058 MRM2Q9UI43 246 aaKnown RBP13.19□□□□□ -0.3
RET-201ENST00000340058 TRAPPC2LQ9UL33 140 aa13.19□□□□□ -0.3
RET-201ENST00000340058 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
RET-201ENST00000340058 GK2Q14410 553 aaPredicted RBP13.18□□□□□ -0.3
RET-201ENST00000340058 EDDM3AQ14507 147 aa13.18□□□□□ -0.3
RET-201ENST00000340058 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.18□□□□□ -0.3
RET-201ENST00000340058 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.18□□□□□ -0.3
RET-201ENST00000340058 OR4C16Q8NGL9 310 aa13.18□□□□□ -0.3
RET-201ENST00000340058 TINAGL1Q9GZM7 467 aaPredicted RBP13.18□□□□□ -0.3
RET-201ENST00000340058 ATRXP46100 2492 aa13.18□□□□□ -0.3
RET-201ENST00000340058 MCRIP1C9JLW8 97 aa13.18□□□□□ -0.3
RET-201ENST00000340058 DCTN6O00399 190 aa13.18□□□□□ -0.3
RET-201ENST00000340058 SPRY1O43609 319 aaPredicted RBP13.18□□□□□ -0.3
RET-201ENST00000340058 VAMP5O95183 116 aa13.18□□□□□ -0.3
RET-201ENST00000340058 NAGAP17050 411 aa13.18□□□□□ -0.3
RET-201ENST00000340058 SLC10A1Q14973 349 aa13.18□□□□□ -0.3
RET-201ENST00000340058 ACER2Q5QJU3 275 aa13.18□□□□□ -0.3
RET-201ENST00000340058 ATG4DQ86TL0 474 aaPredicted RBP13.18□□□□□ -0.3
RET-201ENST00000340058 OR51F2Q8NH61 342 aa13.18□□□□□ -0.3
RET-201ENST00000340058 SLAMF9Q96A28 289 aa13.18□□□□□ -0.3
RET-201ENST00000340058 ZNF436Q9C0F3 470 aaPredicted RBP13.18□□□□□ -0.3
RET-201ENST00000340058 B3GNT2Q9NY97 397 aa13.18□□□□□ -0.3
RET-201ENST00000340058 TUBG1P23258 451 aa13.18□□□□□ -0.3
RET-201ENST00000340058 CYCSP99999 105 aaKnown RBP13.18□□□□□ -0.3
RET-201ENST00000340058 CLN3Q13286 438 aa13.18□□□□□ -0.3
RET-201ENST00000340058 C3AR1Q16581 482 aa13.18□□□□□ -0.3
RET-201ENST00000340058 STK35Q8TDR2 534 aa13.18□□□□□ -0.3
RET-201ENST00000340058 GON7Q9BXV9 100 aa13.18□□□□□ -0.3
RET-201ENST00000340058 ZCCHC4Q9H5U6 513 aa13.18□□□□□ -0.3
RET-201ENST00000340058 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
RET-201ENST00000340058 FBXO4Q9UKT5 387 aa13.18□□□□□ -0.3
RET-201ENST00000340058 DIDO1Q9BTC0 2240 aaKnown RBP13.18□□□□□ -0.3
RET-201ENST00000340058 IGHV5-10-1A0A0J9YXX1 117 aa13.17□□□□□ -0.3
RET-201ENST00000340058 CBR3O75828 277 aa13.17□□□□□ -0.3
RET-201ENST00000340058 NXPH2O95156 264 aa13.17□□□□□ -0.3
RET-201ENST00000340058 RAC2P15153 192 aa13.17□□□□□ -0.3
RET-201ENST00000340058 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
RET-201ENST00000340058 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
RET-201ENST00000340058 SLC25A26Q70HW3 274 aa13.17□□□□□ -0.3
RET-201ENST00000340058 ADGRG3Q86Y34 549 aa13.17□□□□□ -0.3
RET-201ENST00000340058 DND1Q8IYX4 353 aaKnown RBP13.17□□□□□ -0.3
RET-201ENST00000340058 D2HGDHQ8N465 521 aa13.17□□□□□ -0.3
RET-201ENST00000340058 NKAIN3Q8N8D7 197 aa13.17□□□□□ -0.3
RET-201ENST00000340058 ZNF709Q8N972 641 aa13.17□□□□□ -0.3
RET-201ENST00000340058 DEFB124Q8NES8 71 aa13.17□□□□□ -0.3
RET-201ENST00000340058 OR51A2Q8NGJ7 313 aa13.17□□□□□ -0.3
RET-201ENST00000340058 OR5L1Q8NGL2 311 aa13.17□□□□□ -0.3
RET-201ENST00000340058 TM4SF19Q96DZ7 209 aa13.17□□□□□ -0.3
RET-201ENST00000340058 ZNF286AQ9HBT8 521 aa13.17□□□□□ -0.3
RET-201ENST00000340058 HEATR5BQ9P2D3 2071 aa13.17□□□□□ -0.3
RET-201ENST00000340058 OR5H15A6NDH6 313 aa13.17□□□□□ -0.3
RET-201ENST00000340058 TIMM8AO60220 97 aaPredicted RBP13.17□□□□□ -0.3
RET-201ENST00000340058 PRKACBP22694 351 aa13.17□□□□□ -0.3
RET-201ENST00000340058 HRH1P35367 487 aa13.17□□□□□ -0.3
RET-201ENST00000340058 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
RET-201ENST00000340058 DOK3Q7L591 496 aa13.17□□□□□ -0.3
RET-201ENST00000340058 MARCH1Q8TCQ1 289 aa13.17□□□□□ -0.3
RET-201ENST00000340058 LIN37Q96GY3 246 aaPredicted RBP13.17□□□□□ -0.3
RET-201ENST00000340058 MIXL1Q9H2W2 232 aa13.17□□□□□ -0.3
RET-201ENST00000340058 ABCA4P78363 2273 aa13.17□□□□□ -0.3
RET-201ENST00000340058 F8W036 122 aa13.17□□□□□ -0.3
RET-201ENST00000340058 GDF9O60383 454 aa13.17□□□□□ -0.3
RET-201ENST00000340058 IFNA5P01569 189 aa13.17□□□□□ -0.3
RET-201ENST00000340058 LPLP06858 475 aa13.17□□□□□ -0.3
RET-201ENST00000340058 CD53P19397 219 aa13.17□□□□□ -0.3
RET-201ENST00000340058 BLOC1S1P78537 153 aa13.17□□□□□ -0.3
RET-201ENST00000340058 HACD4Q5VWC8 232 aa13.17□□□□□ -0.3
RET-201ENST00000340058 NAXDQ8IW45 347 aa13.17□□□□□ -0.3
RET-201ENST00000340058 TMEM178AQ8NBL3 297 aa13.17□□□□□ -0.3
RET-201ENST00000340058 ZNF764Q96H86 408 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms