RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 E9PI62 339 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 M0R135 149 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 AIREO43918 545 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 LCATP04180 440 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 SLC2A1P11166 492 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 CELP19835 753 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 KIR2DL3P43628 341 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 LSM3P62310 102 aaKnown RBP12.8□□□□□ -0.36
CSRP1-201ENST00000340006 ZNF829Q3KNS6 432 aaPredicted RBP12.8□□□□□ -0.36
CSRP1-201ENST00000340006 ARL9Q6T311 187 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 TMEM108Q6UXF1 575 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 FAM169BQ8N8A8 192 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 IL17RDQ8NFM7 739 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 ZNF799Q96GE5 643 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 POM121L2Q96KW2 1035 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 OR51E2Q9H255 320 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 NPDC1Q9NQX5 325 aaPredicted RBP12.8□□□□□ -0.36
CSRP1-201ENST00000340006 ATE1O95260 518 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 CECR9P0C854 216 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 RNF224P0DH78 156 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 ZNF121P58317 390 aaPredicted RBP12.8□□□□□ -0.36
CSRP1-201ENST00000340006 TAS2R43P59537 309 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 ZNF544Q6NX49 715 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 MYPOPQ86VE0 399 aaPredicted RBP12.8□□□□□ -0.36
CSRP1-201ENST00000340006 C4orf45Q96LM5 186 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 BCL7BQ9BQE9 202 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 OR51B6Q9H340 312 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 NPAP1Q9NZP6 1156 aa12.8□□□□□ -0.36
CSRP1-201ENST00000340006 CRNNQ9UBG3 495 aaPredicted RBP12.8□□□□□ -0.36
CSRP1-201ENST00000340006 TRBV2A0A0J9YWF9 115 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 LOC110117498-PIK3R3F6TDL0 507 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 TBX1O43435 398 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 ABHD16AO95870 558 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 CRYAAP02489 173 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 CRYGSP22914 178 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 PSMA1P25786 263 aaKnown RBP12.79□□□□□ -0.36
CSRP1-201ENST00000340006 DCTDP32321 178 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 PEX19P40855 299 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 ODF4Q2M2E3 257 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 TIMM50Q3ZCQ8 353 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 DRAM2Q6UX65 266 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 FAM57BQ71RH2 274 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 RADILQ96JH8 1075 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 DACH2Q96NX9 599 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 CHCHD6Q9BRQ6 235 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 ATPIF1Q9UII2 106 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 SIRT4Q9Y6E7 314 aaPredicted RBP12.79□□□□□ -0.36
CSRP1-201ENST00000340006 R4GMQ9 66 aa12.79□□□□□ -0.36
CSRP1-201ENST00000340006 USP9XQ93008 2570 aaPredicted RBP12.79□□□□□ -0.36
CSRP1-201ENST00000340006 LOC100506127A0A0U1RQW1 187 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 PRSS44E7EML9 344 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 C19orf84I3L1E1 186 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 PNPP00491 289 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 ACSM4P0C7M7 580 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 GABRA5P31644 462 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 VBP1P61758 197 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 MRPL28Q13084 256 aaKnown RBP12.78□□□□□ -0.36
CSRP1-201ENST00000340006 RPL22L1Q6P5R6 122 aaKnown RBP12.78□□□□□ -0.36
CSRP1-201ENST00000340006 HAVCR2Q8TDQ0 301 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 TMEM203Q969S6 136 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 PPP1R14AQ96A00 147 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 PGAM5Q96HS1 289 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 ESRP2Q9H6T0 727 aaKnown RBP12.78□□□□□ -0.36
CSRP1-201ENST00000340006 SP140LQ9H930 580 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 OR52A1Q9UKL2 312 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 UTP20O75691 2785 aaKnown RBP12.78□□□□□ -0.36
CSRP1-201ENST00000340006 PTAFRP25105 342 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 CD40P25942 277 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 MMP16P51512 607 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 NCS1P62166 190 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 GPR50Q13585 617 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 GFOD2Q3B7J2 385 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 C3orf36Q3SXR2 165 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 CCDC58Q4VC31 144 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 BCL2L15Q5TBC7 163 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
CSRP1-201ENST00000340006 DCLRE1CQ96SD1 692 aaKnown RBP12.78□□□□□ -0.36
CSRP1-201ENST00000340006 PBOV1Q9GZY1 135 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 FRRS1LQ9P0K9 344 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 ST6GALNAC2Q9UJ37 374 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
CSRP1-201ENST00000340006 SF3B6Q9Y3B4 125 aaKnown RBP12.78□□□□□ -0.36
CSRP1-201ENST00000340006 A0A1W2PPW3 197 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 TRIM64BA6NI03 449 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 SLC22A1O15245 554 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 PLPP2O43688 288 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 FAM157BP0CG42 384 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 EPXP11678 715 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 PCSK6P29122 969 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 OTX1P32242 354 aaPredicted RBP12.77□□□□□ -0.37
CSRP1-201ENST00000340006 CRYBB2P43320 205 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 RPS25P62851 125 aaKnown RBP12.77□□□□□ -0.37
CSRP1-201ENST00000340006 NAAAQ02083 359 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 BSPH1Q075Z2 132 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 SLC3A1Q07837 685 aa12.77□□□□□ -0.37
CSRP1-201ENST00000340006 MFGE8Q08431 387 aaPredicted RBP12.77□□□□□ -0.37
CSRP1-201ENST00000340006 ALKBH1Q13686 389 aaKnown RBP12.77□□□□□ -0.37
CSRP1-201ENST00000340006 SPCS2Q15005 226 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms