RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 C1orf53Q5VUE5 145 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 OTPQ5XKR4 325 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 FCRL6Q6DN72 434 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 MED25Q71SY5 747 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 OR9K2Q8NGE7 335 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 LCN9Q8WX39 176 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 NKD1Q969G9 470 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 NTNG2Q96CW9 530 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 MUCL1Q96DR8 90 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 TGIF2Q9GZN2 237 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 DHDHQ9UQ10 334 aa8.41□□□□□ -1.06
NECAP1-201ENST00000339754 TCAPO15273 167 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 ZNF264O43296 627 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 NKX2-2O95096 273 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 TXNDC12O95881 172 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 GAPDHP04406 335 aaKnown RBP8.4□□□□□ -1.06
NECAP1-201ENST00000339754 IFNA6P05013 189 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 SOD3P08294 240 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 LMO1P25800 156 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 CASP6P55212 293 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 MEP1BQ16820 701 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 PRICKLE4Q2TBC4 344 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 ADAMTSL4Q6UY14 1074 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 ERN2Q76MJ5 926 aaKnown RBP8.4□□□□□ -1.06
NECAP1-201ENST00000339754 ZNF550Q7Z398 422 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 TGIF2LXQ8IUE1 241 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 HIST3H2BBQ8N257 126 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 CSNK1A1LQ8N752 337 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 OR4D6Q8NGJ1 314 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 TERB2Q8NHR7 220 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 MAFIPQ8WZ33 124 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 OR8B4Q96RC9 309 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 GPR61Q9BZJ8 451 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 EIF5A2Q9GZV4 153 aaKnown RBP8.4□□□□□ -1.06
NECAP1-201ENST00000339754 PPP1R14DQ9NXH3 145 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 GTF2A1LQ9UNN4 478 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 HIF3AQ9Y2N7 669 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 TMEM14AQ9Y6G1 99 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 HEATR5AQ86XA9 2040 aa8.4□□□□□ -1.06
NECAP1-201ENST00000339754 ZNF724A8MTY0 619 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 LATO43561 262 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 NME2P1O60361 137 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BKO60814 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF217O75362 1048 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 KAT7O95251 611 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 TIMP1P01033 207 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BJP06899 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 SFTPBP07988 381 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 SMIM10L1P0DMW3 83 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 FSTP19883 344 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BOP23527 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 CRABP1P29762 137 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BBP33778 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 CEACAM6P40199 344 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BDP58876 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 CD81P60033 236 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BCP62807 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 SPOCK1Q08629 439 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 TDGQ13569 410 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 CCINQ13939 588 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 GPR18Q14330 331 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST2H2BEQ16778 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 KHDC3LQ587J8 217 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 MESTQ5EB52 335 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-201ENST00000339754 CLEC9AQ6UXN8 241 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 MAMDC2Q7Z304 686 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-201ENST00000339754 RTN4RL2Q86UN3 420 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 OR4N2Q8NGD1 307 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 OR52E1Q8NGJ3 308 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 OTOSQ8NHW6 89 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 CD300LFQ8TDQ1 290 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 ST7LQ8TDW4 575 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 SMARCD2Q92925 531 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BHQ93079 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 SLC25A44Q96H78 314 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-201ENST00000339754 SMIM10Q96HG1 83 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 INTS14Q96SY0 518 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BNQ99877 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 HIST1H2BMQ99879 126 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 SOX7Q9BT81 388 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 SLC35B3Q9H1N7 401 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 CKLFQ9UBR5 152 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 DAPP1Q9UN19 280 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 TP53TG5Q9Y2B4 290 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 TMED3Q9Y3Q3 217 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 FANCMQ8IYD8 2048 aa8.4□□□□□ -1.07
NECAP1-201ENST00000339754 CEACAM18A8MTB9 384 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 K7EQS6 105 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 FGF17O60258 216 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 JTBO76095 146 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 TBC1D3HP0C7X1 549 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 COX5BP10606 129 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF708P17019 499 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 C5AR1P21730 350 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF84P51523 738 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 CDK3Q00526 305 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 MFGE8Q08431 387 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ITPRIPL2Q3MIP1 535 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 TMEM52BQ4KMG9 183 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms