RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 COL5A1-AS1Q5SY13 56 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 FBXL22Q6P050 247 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 RPUSD3Q6P087 351 aaKnown RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 STAC2Q6ZMT1 411 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 LRRC70Q7Z2Q7 622 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 VRK2Q86Y07 508 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF679Q8IYX0 411 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 C1orf87Q8N0U7 546 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 NXPE1Q8N323 547 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 EDAQ92838 391 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 OR8D2Q9GZM6 311 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC26A1Q9H2B4 701 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 OR52D1Q9H346 318 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF430Q9H8G1 570 aaPredicted RBP8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 TM7SF3Q9NS93 570 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 FKBP11Q9NYL4 201 aa8.67□□□□□ -1.02
PTCHD4-201ENST00000339488 AQP7P3A6NL99 342 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 SYT7O43581 403 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 UMODP07911 640 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC6A9P48067 706 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 YBEYP58557 167 aaPredicted RBP8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 GNB2P62879 340 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 C1orf189Q5VU69 101 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 CDCP2Q5VXM1 449 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 CD300LGQ6UXG3 332 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 NUP54Q7Z3B4 507 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 DCXRQ7Z4W1 244 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 OR56B2PQ8NGI1 322 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 OR10AC1Q8NH08 325 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 SCARF2Q96GP6 870 aaPredicted RBP8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 CYYR1Q96J86 154 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF607Q96SK3 696 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 ULBP3Q9BZM4 244 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 OR11A1Q9GZK7 315 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 CYP8B1Q9UNU6 501 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 RNF115Q9Y4L5 304 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 PLXNA3P51805 1871 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 A0A1W2PQH9 124 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 K7EP13 123 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 MTX2O75431 263 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 ZFPL1O95159 310 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 IGLV3-25P01717 112 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 SOD2P04179 222 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 THY1P04216 161 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 OR5G3P0C626 314 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF735P0CB33 412 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 LAMP2P13473 410 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 SGSHP51688 502 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 AGERQ15109 404 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 TMEM268Q5VZI3 342 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 METTL7BQ6UX53 244 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 TOMM20LQ6UXN7 152 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 GID4Q8IVV7 300 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF683Q8IZ20 524 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 GVQW1Q8N7I0 195 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 CYB561D1Q8N8Q1 229 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 OR4C5Q8NGB2 326 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 OR14C36Q8NHC7 312 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 FAM213BQ8TBF2 198 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 NKD1Q969G9 470 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 IL22RA2Q969J5 263 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC35E1Q96K37 410 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 OR10C1Q96KK4 312 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 HCFC1R1Q9NWW0 138 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 KLHL28Q9NXS3 571 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 CLEC5AQ9NY25 188 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 CRLS1Q9UJA2 301 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 MTCH2Q9Y6C9 303 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 DOCK3Q8IZD9 2030 aa8.66□□□□□ -1.02
PTCHD4-201ENST00000339488 TRAV27A0A087WT01 109 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 A0A1W2PN81 502 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 RAB27BO00194 218 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 CHRNA7P36544 502 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 PBX2P40425 430 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 ACAA2P42765 397 aaKnown RBP8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 SLC6A12P48065 614 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 ASCL1P50553 236 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 MANFP55145 182 aaKnown RBP8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 ARHGAP11BQ3KRB8 267 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 CHRFAM7AQ494W8 412 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 OR4C11Q6IEV9 310 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 EIF5AL1Q6IS14 154 aaKnown RBP8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 MED25Q71SY5 747 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 P4HA3Q7Z4N8 544 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 PFN4Q8NHR9 129 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 TMEM37Q8WXS4 190 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 THRSPQ92748 146 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 TNFRSF14Q92956 283 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 PCBD2Q9H0N5 130 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 TAS2R8Q9NYW2 309 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 IL19Q9UHD0 177 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 NAGKQ9UJ70 344 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 CDV3Q9UKY7 258 aaKnown RBP8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 POMT1Q9Y6A1 747 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 SELENOKQ9Y6D0 94 aa8.65□□□□□ -1.02
PTCHD4-201ENST00000339488 ZNF736B4DX44 427 aaPredicted RBP8.65□□□□□ -1.03
PTCHD4-201ENST00000339488 SOX1O00570 391 aaPredicted RBP8.65□□□□□ -1.03
PTCHD4-201ENST00000339488 CNMDO75829 334 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms