RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TPTEP56180 551 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 LMO4P61968 165 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 SNAI3Q3KNW1 292 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 ZMAT1Q5H9K5 638 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 CPOQ8IVL8 374 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 BBS1Q8NFJ9 593 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 DNAJC9Q8WXX5 260 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 OTULINQ96BN8 352 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 SLAMF6Q96DU3 332 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 ELMOD3Q96FG2 381 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 ZNF799Q96GE5 643 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 AMELYQ99218 206 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 GABARAPL1Q9H0R8 117 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 OR51V1Q9H2C8 321 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 NARFLQ9H6Q4 476 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 TMEM160Q9NX00 188 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 DCAF16Q9NXF7 216 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 A0A1B0GWJ7 208 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 IQCF6A8MYZ5 107 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 PRR23D1E9PI22 279 aaPredicted RBP12.91□□□□□ -0.34
PRKN-201ENST00000338468 G3V2T6 193 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 HAX1O00165 279 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 LMX1BO60663 402 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 LCATP04180 440 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 PRR23D2P0DMB1 279 aaPredicted RBP12.91□□□□□ -0.34
PRKN-201ENST00000338468 IGFBP5P24593 272 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 EPHA2P29317 976 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 CDH15P55291 814 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 TNFAIP6P98066 277 aaPredicted RBP12.91□□□□□ -0.34
PRKN-201ENST00000338468 GK2Q14410 553 aaPredicted RBP12.91□□□□□ -0.34
PRKN-201ENST00000338468 AVPI1Q5T686 147 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 DPY19L4Q7Z388 723 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 ERI1Q8IV48 349 aaKnown RBP12.91□□□□□ -0.34
PRKN-201ENST00000338468 OR8G5Q8NG78 346 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 OR2Z1Q8NG97 314 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 OR6N2Q8NGY6 317 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 SPTSSAQ969W0 71 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 ZMYND19Q96E35 227 aaPredicted RBP12.91□□□□□ -0.34
PRKN-201ENST00000338468 INTS14Q96SY0 518 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 SLC30A2Q9BRI3 323 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 EGLN1Q9GZT9 426 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 KIF17Q9P2E2 1029 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 TMEFF2Q9UIK5 374 aaPredicted RBP12.91□□□□□ -0.34
PRKN-201ENST00000338468 CDC42EP3Q9UKI2 254 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 WIPI2Q9Y4P8 454 aa12.91□□□□□ -0.34
PRKN-201ENST00000338468 FAM157AC9JC47 383 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 H0YL77 283 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 MLNRO43193 412 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 SELENOFO60613 162 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 CIB2O75838 187 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 TGFAP01135 160 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 PAICSP22234 425 aaKnown RBP12.9□□□□□ -0.34
PRKN-201ENST00000338468 PRKXP51817 358 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 MVKQ03426 396 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 EIF2B1Q14232 305 aaKnown RBP12.9□□□□□ -0.34
PRKN-201ENST00000338468 PTGES3Q15185 160 aaKnown RBP12.9□□□□□ -0.34
PRKN-201ENST00000338468 HFEQ30201 348 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 FAM166AQ6J272 317 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 DRAM2Q6UX65 266 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 CCDC121Q6ZUS5 278 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 SPATC1Q76KD6 591 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 LINC01356Q8N9X3 169 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 RNF133Q8WVZ7 376 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 ITLN1Q8WWA0 313 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 CCL17Q92583 94 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 KCNJ15Q99712 375 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 COPS4Q9BT78 406 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 ABHD6Q9BV23 337 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 CENPMQ9NSP4 180 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 TVP23BQ9NYZ1 205 aa12.9□□□□□ -0.34
PRKN-201ENST00000338468 CCDC182A6NF36 153 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 CLDN25C9JDP6 229 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 ZNF878C9JN71 531 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 M0R129 80 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 PRODHO43272 600 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 SLC2A1P11166 492 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 FCGR1AP12314 374 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 SLC6A9P48067 706 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 ACTR3P61158 418 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 ESRRGP62508 458 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 EFNB1P98172 346 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 ZNF92Q03936 586 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 SNAPC1Q16533 368 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 KLHL12Q53G59 568 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 GLYATL3Q5SZD4 288 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 PRSS45Q7RTY3 260 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 ZDHHC13Q8IUH4 622 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 ZNF283Q8N7M2 679 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 BHLHE23Q8NDY6 225 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 OR10AD1Q8NGE0 317 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 OR2AE1Q8NHA4 323 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 PYDC1Q8WXC3 89 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 ZNF582Q96NG8 517 aaPredicted RBP12.89□□□□□ -0.35
PRKN-201ENST00000338468 OR2V2Q96R30 315 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 SEMA6AQ9H2E6 1030 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 KRT84Q9NSB2 600 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 IL19Q9UHD0 177 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 KCNS2Q9ULS6 477 aa12.89□□□□□ -0.35
PRKN-201ENST00000338468 KLHDC2Q9Y2U9 406 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms