RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ZNF85Q03923 595 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 MED21Q13503 144 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 GALEQ14376 348 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 SWI5Q1ZZU3 235 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 ZNF684Q5T5D7 378 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 PAMR1Q6UXH9 720 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 NAA40Q86UY6 237 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 KLF14Q8TD94 323 aaPredicted RBP13.21□□□□□ -0.29
SEC13-201ENST00000337354 GGHQ92820 318 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 NINJ1Q92982 152 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 TMEM80Q96HE8 168 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 CNBD2Q96M20 576 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 OR2J1Q9GZK6 312 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 PSORS1C1Q9UIG5 152 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 DUSP13Q9UII6 198 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 GPR160Q9UJ42 338 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 LAMP3Q9UQV4 416 aa13.21□□□□□ -0.29
SEC13-201ENST00000337354 TEX15Q9BXT5 2789 aa13.21□□□□□ -0.3
SEC13-201ENST00000337354 IGLV3-9A0A075B6K5 115 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 TMEM269A0A1B0GVZ9 245 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 PSMD9O00233 223 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 ATE1O95260 518 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 IGHV3-13P01766 116 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 RAF1P04049 648 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 ANXA2P07355 339 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 SOD3P08294 240 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 RAC2P15153 192 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 ZNF121P58317 390 aaPredicted RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 PSMA6P60900 246 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 MST1LQ2TV78 715 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 ZNF829Q3KNS6 432 aaPredicted RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 CDONQ4KMG0 1287 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 FBXW12Q6X9E4 464 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 SSX6Q7RTT6 188 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 PRSS45Q7RTY3 260 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 RFLNBQ8N5W9 214 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 ITFG2Q969R8 447 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 HAVCR1Q96D42 359 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 TRAF4Q9BUZ4 470 aaPredicted RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 MRPL37Q9BZE1 423 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 RGCCQ9H4X1 137 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 OPA3Q9H6K4 179 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 CHCHD3Q9NX63 227 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 ERVK13-1Q9NX77 482 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 MRM2Q9UI43 246 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 ST6GALNAC2Q9UJ37 374 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 TPRKBQ9Y3C4 175 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 PMF1-BGLAPU3KQ54 211 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 TMEM129A0AVI4 362 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 PRR32B1ATL7 298 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 XRCC2O43543 280 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 XPNPEP2O43895 674 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 FAM20BO75063 409 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 CD8AP01732 235 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 CFL1P23528 166 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 DNASE1P24855 282 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 LIPAP38571 399 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 KLF3P57682 345 aaPredicted RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 ERVS71-1P61550 626 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 SNRPD2P62316 118 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 ST3GAL4Q11206 333 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 LIPNQ5VXI9 398 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 FAM220AQ7Z4H9 259 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 LHFPL3Q86UP9 236 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 SYS1Q8N2H4 156 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 YIPF7Q8N8F6 280 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 ZNF540Q8NDQ6 660 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 HAVCR2Q8TDQ0 301 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 IGFBPL1Q8WX77 278 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 NRGNQ92686 78 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 CCL19Q99731 98 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 OR10A2Q9H208 303 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 LIME1Q9H400 295 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 MOB1AQ9H8S9 216 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 CGGBP1Q9UFW8 167 aaPredicted RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 ZNF391Q9UJN7 358 aa13.2□□□□□ -0.3
SEC13-201ENST00000337354 EXOSC1Q9Y3B2 195 aaKnown RBP13.2□□□□□ -0.3
SEC13-201ENST00000337354 SLC1A7O00341 560 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 SLC2A1P11166 492 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 SELEP16581 610 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 MYL12AP19105 171 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 CD53P19397 219 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 MRPL28Q13084 256 aaKnown RBP13.19□□□□□ -0.3
SEC13-201ENST00000337354 MSMPQ1L6U9 139 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 SNAI3Q3KNW1 292 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 SPATA46Q5T0L3 261 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 C11orf71Q6IPW1 123 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 FAM57BQ71RH2 274 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 STX19Q8N4C7 294 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 MYDGFQ969H8 173 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 SPSB4Q96A44 273 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 CMBLQ96DG6 245 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 PGAM5Q96HS1 289 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 ZNF649Q9BS31 505 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 ALG8Q9BVK2 526 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 TTTY10Q9BZA0 68 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 MS4A5Q9H3V2 200 aa13.19□□□□□ -0.3
SEC13-201ENST00000337354 CYSLTR2Q9NS75 346 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms