RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 C4orf45Q96LM5 186 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 ZNF700Q9H0M5 742 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 NOTCH3Q9UM47 2321 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 PCNX3Q9H6A9 2034 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 OR5H14A6NHG9 310 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 TTLL8A6PVC2 850 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 PATE3B3GLJ2 98 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 ADAP1O75689 374 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 MPC2O95563 127 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 F12P00748 615 aaPredicted RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 ACSM4P0C7M7 580 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 FAHP16930 419 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 NME2P22392 152 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 CD300LFQ8TDQ1 290 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 C2CD4CQ8TF44 421 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 C11orf40Q8WZ69 217 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 RGP1Q92546 391 aaPredicted RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 RAB3CQ96E17 227 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 LINC00052Q96N35 136 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 ALKBH3Q96Q83 286 aaPredicted RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 PHB2Q99623 299 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 NICN1Q9BSH3 213 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 UBE2ZQ9H832 354 aaPredicted RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 TAS2R8Q9NYW2 309 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 MOKQ9UQ07 419 aa7.38□□□□□ -1.23
HPS4-201ENST00000336873 MRPS28Q9Y2Q9 187 aaKnown RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 MRPS18BQ9Y676 258 aaKnown RBP7.38□□□□□ -1.23
HPS4-201ENST00000336873 PCDH15Q96QU1 1955 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 IGKV1D-42A0A075B6H8 117 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 TMEM272A0A1B0GTI8 110 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 OR4C45A6NMZ5 311 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 C9J4A7 227 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 OR7C1O76099 320 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 GAAP10253 952 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 RBMXP38159 391 aaKnown RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 SLC6A8P48029 635 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 INSM1Q01101 510 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 MC2RQ01718 297 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 ZNF169Q14929 603 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 MFSD13AQ14CX5 517 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 HAGHLQ6PII5 290 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 H1FNTQ75WM6 255 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 GRINAQ7Z429 371 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 P4HA3Q7Z4N8 544 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 ATG4DQ86TL0 474 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 TMEM59Q9BXS4 323 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 PPA2Q9H2U2 334 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 GAREM1Q9H706 876 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 MRPS18AQ9NVS2 196 aaKnown RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 HRH3Q9Y5N1 445 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 A0A096LPE4 126 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 IGHV1OR15-9A0A0B4J2B8 117 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 A0A1W2PPZ6 126 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 CCL2P13500 99 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 AFF3P51826 1226 aaKnown RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 UBE2IP63279 158 aaKnown RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 BDH1Q02338 343 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 MFAP5Q13361 173 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 RBM39Q14498 530 aaKnown RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 SLC25A30Q5SVS4 291 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 TMEM244Q5VVB8 128 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 OR4D6Q8NGJ1 314 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 IL1F10Q8WWZ1 152 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 ZNF524Q96C55 264 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 SCMH1Q96GD3 660 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 CNTD2Q9H8S5 307 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 MBD2Q9UBB5 411 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 NUP210Q8TEM1 1887 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 TRAV1-2A0A0B4J238 106 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 A0A0G2JK05 382 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 ARPC3O15145 178 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 KLF4O43474 513 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 SPRY1O43609 319 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 POU2F2P09086 479 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 VSIG10L2P0DP72 767 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 DPP4P27487 766 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 ATP1B3P54709 279 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 MTCP1P56278 107 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 C17orf67Q0P5P2 114 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 MYBPHQ13203 477 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 FHL5Q5TD97 284 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 LINC00696Q6ZRV3 163 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 ADGRG3Q86Y34 549 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 PRSS35Q8N3Z0 413 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 LILRB2Q8N423 598 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 OR52N5Q8NH56 324 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 ROBO4Q8WZ75 1007 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 OR8B4Q96RC9 309 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 PHF7Q9BWX1 381 aaPredicted RBP7.37□□□□□ -1.23
HPS4-201ENST00000336873 ZFP64Q9NPA5 681 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 GPR173Q9NS66 373 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 FAM86C1Q9NVL1 165 aa7.37□□□□□ -1.23
HPS4-201ENST00000336873 HEATR1Q9H583 2144 aaKnown RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 SPG11Q96JI7 2443 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 IGHV1OR21-1A0A087WYE8 117 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 WRBO00258 174 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 BET1O15155 118 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 OGG1O15527 345 aa7.36□□□□□ -1.23
HPS4-201ENST00000336873 GLSO94925 669 aaPredicted RBP7.36□□□□□ -1.23
HPS4-201ENST00000336873 CXCL2P19875 107 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms