RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SLC25A4P12235 298 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF140P52738 457 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ARG2P78540 354 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 PAX5Q02548 391 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 LMAN2Q12907 356 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OR5M11Q96RB7 305 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ADOQ96SZ5 270 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 AP5S1Q9NUS5 200 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 WSB1Q9Y6I7 421 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 DUS4LO95620 317 aaKnown RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 PNLIPRP3Q17RR3 467 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TUSC1Q2TAM9 212 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 DRAM2Q6UX65 266 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 CPEB3Q8NE35 698 aaKnown RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 COPS9Q8WXC6 57 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TAAR6Q96RI8 345 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ATP5SQ99766 215 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 GPA33Q99795 319 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 PTDSS2Q9BVG9 487 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 EGLN1Q9GZT9 426 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ANKRD61A6NGH8 418 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 MRPL33O75394 65 aaKnown RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TEAD2Q15562 447 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM241Q24JQ0 296 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 EMC4Q5J8M3 183 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OR2A2Q6IF42 318 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 C12orf54Q6X4T0 127 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 IL17FQ96PD4 163 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 GPX7Q96SL4 187 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 NMNAT3Q96T66 252 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SLC17A5Q9NRA2 495 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 LAMTOR5O43504 91 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 HAPLN1P10915 354 aaPredicted RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 PCP4P48539 62 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 PIGPP57054 158 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 C9orf152Q5JTZ5 239 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 FAM26DQ5JW98 314 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 CPEB2Q7Z5Q1 589 aaKnown RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 NPWQ8N729 165 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 CCNL2Q96S94 520 aaPredicted RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 ZMAT3Q9HA38 289 aaKnown RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 CSNK1G1Q9HCP0 422 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 PSENENQ9NZ42 101 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 EXOGQ9Y2C4 368 aaKnown RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 A0A087WV62 115 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 TMX2-CTNND1H3BSU7 103 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 HHEXQ03014 270 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 HES1Q14469 280 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 NECTIN4Q96NY8 510 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 ZIC5Q96T25 663 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 APOBEC3BQ9UH17 382 aaKnown RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 AKR7A2O43488 359 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 INPP5JQ15735 1006 aaPredicted RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 CNEP1R1Q8N9A8 125 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 UBTD2Q8WUN7 234 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM37Q8WXS4 190 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 SNX22Q96L94 193 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 C1QTNF3Q9BXJ4 246 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 Q9Y3F1 56 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 CLEC18AA5D8T8 446 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 EN2P19622 333 aaPredicted RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 OR1C1Q15619 314 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 SOWAHCQ53LP3 525 aaPredicted RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 OR2W3Q7Z3T1 314 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 MYPOPQ86VE0 399 aaPredicted RBP5.65□□□□□ -1.5
CSMD1-201ENST00000335551 CLEC18CQ8NCF0 446 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 EID2BQ96D98 161 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 BOD1Q96IK1 185 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 Q9N2K0 584 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 PCSK6P29122 969 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 OR10J1P30954 320 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 FOXA1P55317 472 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 HTRA3P83110 453 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 HOXC5Q00444 222 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 FAM74A3Q4VXF1 159 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 SLCO4A1Q96BD0 722 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 NTNG2Q96CW9 530 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 IL21Q9HBE4 155 aa5.65□□□□□ -1.5
CSMD1-201ENST00000335551 TOGARAM1Q9Y4F4 1720 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 COCHO43405 550 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 ACAA1P09110 424 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-201ENST00000335551 BMP5P22003 454 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 LGALS4P56470 323 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 TPBGQ13641 420 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 C11orf87Q6NUJ2 197 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 TBPL2Q6SJ96 375 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 LBX2Q6XYB7 198 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 ARHGEF39Q8N4T4 335 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 GBF1Q92538 1859 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 TREX1Q9NSU2 369 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 WNT6Q9Y6F9 365 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 LOC107986453A0A1B0GWG9 222 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 MAN2B1O00754 1011 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 IL5P05113 134 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 CD200P41217 278 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 SLC6A12P48065 614 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 LTC4SQ16873 150 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 GLDNQ6ZMI3 551 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-201ENST00000335551 C6orf201Q7Z4U5 140 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 DOLPP1Q86YN1 238 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms