RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TRAPPC6BQ86SZ2 158 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CNEP1R1Q8N9A8 125 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF565Q8N9K5 539 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 OR13C9Q8NGT0 318 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 SMIM4Q8WVI0 70 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF775Q96BV0 537 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 SLC5A7Q9GZV3 580 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 DLL4Q9NR61 685 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 VSX1Q9NZR4 365 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 KLK13Q9UKR3 277 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 DTX4Q9Y2E6 619 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 TRAV36DV7A0A075B6V5 113 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ALG1L2C9J202 215 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 PYCARD-AS1I3L0S3 204 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 CD3DP04234 171 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 RD3LP0DJH9 198 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF16P17020 682 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 HTR2CP28335 458 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 PCBP3P57721 371 aaKnown RBP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 TMPRSS3P57727 454 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 PDZK1IP1Q13113 114 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 MRPL14Q6P1L8 145 aaKnown RBP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 C9orf62Q8N4C0 152 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 OR2AK2Q8NG84 335 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 SLAMF9Q96A28 289 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 PGAM5Q96HS1 289 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 C12orf57Q99622 126 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 SULT4A1Q9BR01 284 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 MS4A7Q9GZW8 240 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-201ENST00000334136 ZFP64Q9NPA5 681 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 REV1Q9UBZ9 1251 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 HIF3AQ9Y2N7 669 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 KIAA1549LQ6ZVL6 1849 aa10.6□□□□□ -0.71
HDAC6-201ENST00000334136 KIF26BQ2KJY2 2108 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 RPS10-NUDT3A0A1W2PQS6 291 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 PHYHO14832 338 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 RPS10P46783 165 aaKnown RBP10.59□□□□□ -0.71
HDAC6-201ENST00000334136 SLC35A1P78382 337 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 CDK5R1Q15078 307 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 PRSS53Q2L4Q9 553 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 GLYR1Q49A26 553 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-201ENST00000334136 ADAM5Q6NVV9 412 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 Q6ZTK2 550 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 FAM122BQ7Z309 247 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 ST7LQ8TDW4 575 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 ZCCHC14Q8WYQ9 949 aaKnown RBP10.59□□□□□ -0.71
HDAC6-201ENST00000334136 SARAFQ96BY9 339 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 SMIM19Q96E16 107 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 PMS2P1A4D2B8 440 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 OR6C65A6NJZ3 312 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 MASP2O00187 686 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 CRYABP02511 175 aaKnown RBP10.59□□□□□ -0.71
HDAC6-201ENST00000334136 SERPINA5P05154 406 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 C1orf140Q5VVS0 124 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 NHLRC1Q6VVB1 395 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 PIP4P1Q86T03 277 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 KDM8Q8N371 416 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 OR5D18Q8NGL1 313 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 C20orf24Q9BUV8 137 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 SLC22A11Q9NSA0 550 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 HPXP02790 462 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 TMEM225BP0DP42 221 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 FKBP2P26885 142 aaKnown RBP10.59□□□□□ -0.71
HDAC6-201ENST00000334136 SUMO3P55854 103 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-201ENST00000334136 MLF1P58340 268 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 POU3F1Q03052 451 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-201ENST00000334136 MEF2DQ14814 521 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 ABHD12BQ7Z5M8 362 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-201ENST00000334136 OR11H7Q8NGC8 314 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 STK35Q8TDR2 534 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 RTTNQ86VV8 2226 aa10.59□□□□□ -0.71
HDAC6-201ENST00000334136 TMEM235A6NFC5 223 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 OR5H14A6NHG9 310 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 WDPCPO95876 746 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 COX6A1P12074 109 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 MEOX1P50221 254 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 CAPZA1P52907 286 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 S100A12P80511 92 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 GUCA2AQ02747 115 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 PCOLCEQ15113 449 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 AVPI1Q5T686 147 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 OR51T1Q8NGJ9 327 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 FBXW5Q969U6 566 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 C20orf141Q9NUB4 165 aa10.58□□□□□ -0.71
HDAC6-201ENST00000334136 SCN8AQ9UQD0 1980 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 AIPO00170 330 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 PRRG2O14669 202 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 OIP5O43482 229 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 EIF1BO60739 113 aaKnown RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 ATG12O94817 140 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 IGLV3-21P80748 117 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 SNTB1Q13884 538 aaKnown RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 ZNF674Q2M3X9 581 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 NPSR1Q6W5P4 371 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 MRGPRX4Q96LA9 322 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 LINC00052Q96N35 136 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 TRAF4Q9BUZ4 470 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 EMC9Q9Y3B6 208 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms