RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 A0A1W2PPR1 153 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 J3QRK9 145 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 SRSF10O75494 262 aaKnown RBP14.29□□□□□ -0.12
SHOX-201ENST00000334060 UBL3O95164 117 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 FAM157BP0CG42 384 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 STOMP27105 288 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 HOXC12P31275 282 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 RAB35Q15286 201 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 NEDD8Q15843 81 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 PRSS48Q7RTY5 328 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 KRT77Q7Z794 578 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 RDH10Q8IZV5 341 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 C17orf78Q8N4C9 275 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 NANOGP1Q8N7R0 232 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 YIPF7Q8N8F6 280 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 SNX33Q8WV41 574 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 HPS1Q92902 700 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 CDCA4Q9BXL8 241 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 ACOT13Q9NPJ3 140 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 DDX28Q9NUL7 540 aaKnown RBP14.29□□□□□ -0.12
SHOX-201ENST00000334060 PKDREJQ9NTG1 2253 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 FAM172BPA6NC97 362 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 IGLV1-44P01699 117 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 CBR1P16152 277 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 AGAP20933 346 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 CD40LGP29965 261 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 ROM1Q03395 351 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 SCRN3Q0VDG4 424 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 SPATA46Q5T0L3 261 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 PRSS45Q7RTY3 260 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 PRSS35Q8N3Z0 413 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 SLC30A7Q8NEW0 376 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 MYDGFQ969H8 173 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 HDHD5Q9BXW7 423 aa14.29□□□□□ -0.12
SHOX-201ENST00000334060 ABCA4P78363 2273 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 TUBAL3A6NHL2 446 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 ZNF878C9JN71 531 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 ATP6V1G2-DDX39BF2Z307 99 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 MRPS14O60783 128 aaKnown RBP14.28□□□□□ -0.12
SHOX-201ENST00000334060 SERPINA5P05154 406 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 H2BFMP0C1H6 154 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 IGFBP2P18065 325 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 KIR3DL2P43630 455 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 ZNF121P58317 390 aaPredicted RBP14.28□□□□□ -0.12
SHOX-201ENST00000334060 BSPH1Q075Z2 132 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 INSL4Q14641 139 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 KRTAP27-1Q3LI81 207 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 RFPL4BQ6ZWI9 263 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 ZNF679Q8IYX0 411 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 OR10AC1Q8NH08 325 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 OR2AE1Q8NHA4 323 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 IPCEF1Q8WWN9 437 aaPredicted RBP14.28□□□□□ -0.12
SHOX-201ENST00000334060 DCLRE1CQ96SD1 692 aaKnown RBP14.28□□□□□ -0.12
SHOX-201ENST00000334060 JAM3Q9BX67 310 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 GTF2A1LQ9UNN4 478 aa14.28□□□□□ -0.12
SHOX-201ENST00000334060 IGHV2OR16-5A0A0B4J2B6 119 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 PRSS44E7EML9 344 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 GPRIN2O60269 458 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 ACSM4P0C7M7 580 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 CX3CR1P49238 355 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 MED22Q15528 200 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 AKAP14Q86UN6 197 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 ZNF454Q8N9F8 522 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 OR13C5Q8NGS8 318 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 KCNN2Q9H2S1 579 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 FAM206AQ9NX38 181 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 CRNNQ9UBG3 495 aaPredicted RBP14.27□□□□□ -0.12
SHOX-201ENST00000334060 ENPP5Q9UJA9 477 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 FZR1Q9UM11 496 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 AMDHD2Q9Y303 409 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 EXOSC1Q9Y3B2 195 aaKnown RBP14.27□□□□□ -0.12
SHOX-201ENST00000334060 SNX5Q9Y5X3 404 aa14.27□□□□□ -0.12
SHOX-201ENST00000334060 CSMD1Q96PZ7 3565 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 METTL15A6NJ78 407 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 TMCC2O75069 709 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 HSMCR30P0CW71 290 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 MYL12AP19105 171 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 LOXP28300 417 aaPredicted RBP14.27□□□□□ -0.13
SHOX-201ENST00000334060 OTX1P32242 354 aaPredicted RBP14.27□□□□□ -0.13
SHOX-201ENST00000334060 RBMXP38159 391 aaKnown RBP14.27□□□□□ -0.13
SHOX-201ENST00000334060 SLC6A9P48067 706 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 CSNK2BP67870 215 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 ACTC1P68032 377 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 ACTA1P68133 377 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 GFOD2Q3B7J2 385 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 DMRTC1Q5HYR2 192 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 WDR38Q5JTN6 314 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 ADAM5Q6NVV9 412 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 SYT9Q86SS6 491 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 DMRTC2Q8IXT2 367 aaPredicted RBP14.27□□□□□ -0.13
SHOX-201ENST00000334060 MUCL1Q96DR8 90 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 PDCD1LG2Q9BQ51 273 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 G6PC2Q9NQR9 355 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 PCDHGB1Q9Y5G3 927 aa14.27□□□□□ -0.13
SHOX-201ENST00000334060 PLCE1Q9P212 2302 aa14.26□□□□□ -0.13
SHOX-201ENST00000334060 HEATR1Q9H583 2144 aaKnown RBP14.26□□□□□ -0.13
SHOX-201ENST00000334060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.26□□□□□ -0.13
SHOX-201ENST00000334060 DEFB108AA8MXU0 73 aa14.26□□□□□ -0.13
SHOX-201ENST00000334060 M0R135 149 aa14.26□□□□□ -0.13
SHOX-201ENST00000334060 LMX1BO60663 402 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms