RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 TSTQ16762 297 aaKnown RBP11.94□□□□□ -0.5
LIMS1-201ENST00000332345 NXNL2Q5VZ03 156 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 SPATC1Q76KD6 591 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 MEPCEQ7L2J0 689 aaKnown RBP11.94□□□□□ -0.5
LIMS1-201ENST00000332345 SLC16A9Q7RTY1 509 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 PQLC1Q8N2U9 271 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 ZNF283Q8N7M2 679 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 MAPK1IP1LQ8NDC0 245 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 OTOSQ8NHW6 89 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 RNF133Q8WVZ7 376 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 ZNF582Q96NG8 517 aaPredicted RBP11.94□□□□□ -0.5
LIMS1-201ENST00000332345 YIPF3Q9GZM5 350 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 SAP30LQ9HAJ7 183 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 MSL2Q9HCI7 577 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 LAMP5Q9UJQ1 280 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 CSPG4Q6UVK1 2322 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 CR1P17927 2039 aa11.94□□□□□ -0.5
LIMS1-201ENST00000332345 YLPM1P49750 1951 aaKnown RBP11.94□□□□□ -0.5
LIMS1-201ENST00000332345 SLC22A31A6NKX4 558 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 LYNX1G3V0Z9 82 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 EI24O14681 340 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 SELENOFO60613 162 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 HEXAP06865 529 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 H2BFMP0C1H6 154 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 LYNX1P0DP58 116 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 ACHEP22303 614 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 CRYBB2P43320 205 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 CDC42P60953 191 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 GABPB1Q06547 395 aaPredicted RBP11.93□□□□□ -0.5
LIMS1-201ENST00000332345 CDK5R2Q13319 367 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 RIN1Q13671 783 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 ZSCAN26Q16670 478 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 TMEM255AQ5JRV8 349 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 AADACL4Q5VUY2 407 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 OR2T2Q6IF00 324 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 ZBTB49Q6ZSB9 765 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 PGAP1Q75T13 922 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 GID4Q8IVV7 300 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 CBR4Q8N4T8 237 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 OR8G5Q8NG78 346 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 OR13G1Q8NGZ3 307 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 TRUB1Q8WWH5 349 aaKnown RBP11.93□□□□□ -0.5
LIMS1-201ENST00000332345 GTF3AQ92664 365 aaKnown RBP11.93□□□□□ -0.5
LIMS1-201ENST00000332345 IL4I1Q96RQ9 567 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 TMEM14AQ9Y6G1 99 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 MTORP42345 2549 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 ABCA1O95477 2261 aa11.93□□□□□ -0.5
LIMS1-201ENST00000332345 IGHV1-69-2A0A0G2JMI3 117 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 ZSCAN5BA6NJL1 495 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 NCR1O76036 304 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 CD55P08174 381 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 NAA10P41227 235 aaPredicted RBP11.92□□□□□ -0.5
LIMS1-201ENST00000332345 TNFAIP6P98066 277 aaPredicted RBP11.92□□□□□ -0.5
LIMS1-201ENST00000332345 GGTLC2Q14390 218 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 GK2Q14410 553 aaPredicted RBP11.92□□□□□ -0.5
LIMS1-201ENST00000332345 HFEQ30201 348 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 KCTD18Q6PI47 426 aaPredicted RBP11.92□□□□□ -0.5
LIMS1-201ENST00000332345 USP51Q70EK9 711 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 MRPL21Q7Z2W9 205 aaKnown RBP11.92□□□□□ -0.5
LIMS1-201ENST00000332345 OR5AS1Q8N127 324 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 OR2Z1Q8NG97 314 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 OR52H1Q8NGJ2 320 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 OR8J1Q8NGP2 316 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 EME1Q96AY2 570 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 ELMOD3Q96FG2 381 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 NIPAL2Q9H841 368 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 TMEM100Q9NV29 134 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 IMPAD1Q9NX62 359 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 N6AMT1Q9Y5N5 214 aa11.92□□□□□ -0.5
LIMS1-201ENST00000332345 A0A096LNT2 108 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 CCDC182A6NF36 153 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 IQCF6A8MYZ5 107 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 CDC14BO60729 498 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 ANXA2P07355 339 aaKnown RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 TNFRSF1AP19438 455 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 ALOX5APP20292 161 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 OPRL1P41146 370 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 GPR6P46095 362 aaPredicted RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 CX3CR1P49238 355 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 SNAI3Q3KNW1 292 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 ZIK1Q3SY52 487 aaPredicted RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 DEGS2Q6QHC5 323 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 BCDIN3DQ7Z5W3 292 aaKnown RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 SPRYD4Q8WW59 207 aaPredicted RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 ASB17Q8WXJ9 295 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 RFKQ969G6 155 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 YIPF5Q969M3 257 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 HRASLS5Q96KN8 279 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 CNN2Q99439 309 aaKnown RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 MNTQ99583 582 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 REPIN1Q9BWE0 567 aaKnown RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 OPA3Q9H6K4 179 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 ZNF275Q9NSD4 429 aaPredicted RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 HAO2Q9NYQ3 351 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 WARS2Q9UGM6 360 aaKnown RBP11.91□□□□□ -0.5
LIMS1-201ENST00000332345 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
LIMS1-201ENST00000332345 GGT3PA6NGU5 568 aa11.9□□□□□ -0.5
LIMS1-201ENST00000332345 M0R129 80 aa11.9□□□□□ -0.5
LIMS1-201ENST00000332345 PPIHO43447 177 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms