RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 GLRA1P23415 457 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 CLN3Q13286 438 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 FAM117AQ9C073 453 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 HIPK2Q9H2X6 1198 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 UNC13CQ8NB66 2214 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 IMPA2O14732 288 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 ZNF74Q16587 644 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 IAH1Q2TAA2 248 aaPredicted RBP9.21□□□□□ -0.94
CHD3-201ENST00000330494 TMEM200AQ86VY9 491 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 ZG16BQ96DA0 208 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 OCEL1Q9H607 264 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 RBFOX1Q9NWB1 397 aaKnown RBP9.21□□□□□ -0.94
CHD3-201ENST00000330494 ZNF816-ZNF321PA0A0X1KG74 233 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 OR1C1Q15619 314 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 GFRALQ6UXV0 394 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 CADM3Q8N126 398 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 ZNF321PQ8N8H1 164 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 OR51A4Q8NGJ6 313 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 OR51A2Q8NGJ7 313 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 UPRTQ96BW1 309 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 TAAR9Q96RI9 348 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 GDF2Q9UK05 429 aaPredicted RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 FLVCR2Q9UPI3 526 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 SHANK3Q9BYB0 1731 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 KIF13BQ9NQT8 1826 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 RAP2BP61225 183 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 FLI1Q01543 452 aaPredicted RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 WDR5BQ86VZ2 330 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 ZNF547Q8IVP9 402 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 PPP1R2P9O14990 202 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 BCKDHBP21953 392 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 NFYAP23511 347 aaPredicted RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 ELLP55199 621 aaPredicted RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 GABARAPL3Q9BY60 117 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 ZCCHC4Q9H5U6 513 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 ESRP2Q9H6T0 727 aaKnown RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 HEYLQ9NQ87 328 aaPredicted RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 ZNF71Q9NQZ8 489 aaPredicted RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 AADACP22760 399 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 CREB3L2Q70SY1 520 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 MDGA2Q7Z553 956 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 OR2L13Q8N349 312 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 FAM26EQ8N5C1 309 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 INTS12Q96CB8 462 aaKnown RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 C10orf90Q96M02 699 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 OPALINQ96PE5 141 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 FAM60AQ9NP50 221 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 RNF150Q9ULK6 438 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 URGCP-MRPS24S4R325 110 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 OR8U8P0C7N1 319 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 HAAOP46952 286 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 ZNF133P52736 654 aaPredicted RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 PNLIPRP2P54317 469 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 PRSS12P56730 875 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 TAF9Q16594 264 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 C17orf107Q6ZR85 190 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 UBALD1Q8TB05 177 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 TXN2Q99757 166 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 ATF6BQ99941 703 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 ZNF2Q9BSG1 426 aaPredicted RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 FBXL4Q9UKA2 621 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 A4GNTQ9UNA3 340 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 EXO1Q9UQ84 846 aaKnown RBP9.2□□□□□ -0.94
CHD3-201ENST00000330494 FBXO7Q9Y3I1 522 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 GPM6AP51674 278 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 DOC2BQ14184 412 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 OR11G2Q8NGC1 345 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 OR10X1Q8NGY0 326 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 NUDCD2Q8WVJ2 157 aa9.2□□□□□ -0.94
CHD3-201ENST00000330494 ACHEP22303 614 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 HOXD11P31277 338 aaPredicted RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 KIAA0141Q14154 515 aaPredicted RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 UBL7Q96S82 380 aaPredicted RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 TXNIPQ9H3M7 391 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 PLEKHB1Q9UF11 243 aaPredicted RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 ZFC3H1O60293 1989 aaKnown RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 MEIKINA0A087WXM9 373 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 SPRY3O43610 288 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 INSL4Q14641 139 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 IL34Q6ZMJ4 242 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 UBAC2Q8NBM4 344 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 OR10Z1Q8NGY1 313 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 DAZAP1Q96EP5 407 aaKnown RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 SMCO4Q9NRQ5 59 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 PIKFYVEQ9Y2I7 2098 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 H3BMH7 237 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 DIO1P49895 249 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 FMODQ06828 376 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 NKG7Q16617 165 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 HSD17B11Q8NBQ5 300 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 OR4C3Q8NH37 302 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 MITD1Q8WV92 249 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 PLK3Q9H4B4 646 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 CYB5BO43169 146 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 CMTM4Q8IZR5 234 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 KCNE4Q8WWG9 221 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 ST8SIA1Q92185 356 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 SPACA9Q96E40 222 aaPredicted RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 IFT22Q9H7X7 185 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms