RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 WIPF3A6NGB9 483 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 OR6C65A6NJZ3 312 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 STK17BO94768 372 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 NAGAP17050 411 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 EMP2P54851 167 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 UNC119Q13432 240 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 CFAP77Q6ZQR2 320 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 SPERTQ8NA61 448 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 PPP1R1CQ8WVI7 109 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 SDHAF3Q9NRP4 125 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 ASH2LQ9UBL3 628 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 RPH3AQ9Y2J0 694 aaPredicted RBP12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 RALGAPA1Q6GYQ0 2036 aa12.5□□□□□ -0.41
ATP2C1-201ENST00000328560 KANTRA0A1W2PQU2 76 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 EFNA2O43921 213 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 IGHMP01871 453 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 VSIG8P0DPA2 414 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 RAB3AP20336 220 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ATP1B3P54709 279 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 SSBP1Q04837 148 aaKnown RBP12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 CLVS2Q5SYC1 327 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 PRAMEF20Q5VT98 475 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 UEVLDQ8IX04 471 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 NKAIN3Q8N8D7 197 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 OR5D18Q8NGL1 313 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 OR5D14Q8NGL3 314 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 OR2I1PQ8NGU4 316 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 WBP1Q96G27 269 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 VRK1Q99986 396 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 SLCO5A1Q9H2Y9 848 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 TUBAL3A6NHL2 446 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 OR2J2O76002 312 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 HCKP08631 526 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ZP3P21754 424 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF93P35789 620 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 MPPED2Q15777 294 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 C5orf46Q6UWT4 87 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ARMC10Q8N2F6 343 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 SLC22A24Q8N4F4 322 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 PAQR4Q8N4S7 273 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 PLPP5Q8NEB5 264 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 OR5M9Q8NGP3 310 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ST8SIA2Q92186 375 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ALX4Q9H161 411 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ZC4H2Q9NQZ6 224 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 LIPT2A6NK58 231 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 RER1O15258 196 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 SCRG1O75711 98 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ERCC1P07992 297 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 DLSTP36957 453 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF260Q3ZCT1 412 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 C1orf100Q5SVJ3 147 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 MISPQ8IVT2 679 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 ADAD2Q8NCV1 583 aaKnown RBP12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 OR10K1Q8NGX5 313 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 OR1S1Q8NH92 325 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 PRRT1Q99946 306 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 WDR13Q9H1Z4 485 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 FAM206AQ9NX38 181 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 WNT16Q9UBV4 365 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 PRELID1Q9Y255 219 aa12.49□□□□□ -0.41
ATP2C1-201ENST00000328560 A0A1W2PP11 408 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 ADAM10O14672 748 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 LDLRAD4O15165 306 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 ISG15P05161 165 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 RPA2P15927 270 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 PI3P19957 117 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 KLK2P20151 261 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 MMP16P51512 607 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 COL19A1Q14993 1142 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 OR10S1Q8NGN2 331 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 OR5M8Q8NGP6 311 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 GPN3Q9UHW5 284 aaPredicted RBP12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 TTLL8A6PVC2 850 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 HOXD4P09016 255 aaPredicted RBP12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 LAP3P28838 519 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 CLDN6P56747 220 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 MEF2DQ14814 521 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 PHF19Q5T6S3 580 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 RAB12Q6IQ22 244 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 UNQ6126/PRO20091Q6UXV3 157 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 FAM219AQ8IW50 185 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 OR5L2Q8NGL0 311 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 C12orf4Q9NQ89 552 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 SLC5A6Q9Y289 635 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 KCNK7Q9Y2U2 307 aa12.48□□□□□ -0.41
ATP2C1-201ENST00000328560 RAMP1O60894 148 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 AQP8O94778 261 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 CFPP27918 469 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 MPGP29372 298 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 AGTR1P30556 359 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 DEFA5Q01523 94 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 TMEM176BQ3YBM2 270 aaPredicted RBP12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 NAXDQ8IW45 347 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms