RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 SELENBP1Q13228 472 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 Q6ZN92 141 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 MRPL10Q7Z7H8 261 aaKnown RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 C2orf50Q96LR7 162 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 SLC6A18Q96N87 628 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ARHGDIGQ99819 225 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 LPAR5Q9H1C0 372 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 GLIPR2Q9H4G4 154 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 SIRPB1O00241 398 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 SLC25A4P12235 298 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 HRH1P35367 487 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 VRK3Q8IV63 474 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 WDR89Q96FK6 387 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 NOL4LQ96MY1 436 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 EMC6Q9BV81 110 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 MS4A7Q9GZW8 240 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 OR1A1Q9P1Q5 309 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ENTPD2Q9Y5L3 495 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OR7C2O60412 319 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 AVPR2P30518 371 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 AMTP48728 403 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 DCDP81605 110 aaKnown RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 PMS2P11Q13670 270 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 SEZ6L2Q6UXD5 910 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OR2AK2Q8NG84 335 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 OR5K2Q8NHB8 316 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 KLF16Q9BXK1 252 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 TREX1Q9NSU2 369 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 GUSBP08236 651 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 CYBAP13498 195 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 RPL7P18124 248 aaKnown RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 GPR12P47775 334 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 MEOX2P50222 304 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 GUCA2AQ02747 115 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 DOC2BQ14184 412 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 DHRS7BQ6IAN0 325 aaPredicted RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 LRRC30A6NM36 301 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 GZMKP49863 264 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 ENDOGQ14249 297 aaKnown RBP7.22□□□□□ -1.25
CIITA-201ENST00000324288 KIRREL1Q96J84 757 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 CHST6Q9GZX3 395 aa7.22□□□□□ -1.25
CIITA-201ENST00000324288 PHIPQ8WWQ0 1821 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 RFC3P40938 356 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 DUSP2Q05923 314 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 WDR5BQ86VZ2 330 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 OR6K3Q8NGY3 331 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 MARCH1Q8TCQ1 289 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 Q96M85 177 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 BCO1Q9HAY6 547 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 ACOXLQ9NUZ1 547 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 TRAPPC4Q9Y296 219 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 ATP23Q9Y6H3 246 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 KIR2DS5A0A0G2JLQ3 304 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 A0A0G2JNG1 304 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 KIR2DS3K7RE56 304 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 PRLHRP49683 370 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 RANP62826 216 aaKnown RBP7.21□□□□□ -1.25
CIITA-201ENST00000324288 KIR2DS5Q14953 304 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 TIGITQ495A1 244 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 PLA1AQ53H76 456 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 OPN5Q6U736 354 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 S100A7AQ86SG5 101 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 SLC22A24Q8N4F4 322 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 YTHDF2Q9Y5A9 579 aaKnown RBP7.21□□□□□ -1.25
CIITA-201ENST00000324288 DOT1LQ8TEK3 1739 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 ABCD4O14678 606 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 ENPP1P22413 925 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 SNRPGP62308 76 aaKnown RBP7.21□□□□□ -1.25
CIITA-201ENST00000324288 OR2W3Q7Z3T1 314 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 GABRG1Q8N1C3 465 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 OR1J2Q8NGS2 313 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 DEFB127Q9H1M4 99 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 GDE1Q9NZC3 331 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 NUMBLQ9Y6R0 609 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 KCPQ6ZWJ8 1503 aa7.21□□□□□ -1.25
CIITA-201ENST00000324288 RPS27P42677 84 aaKnown RBP7.21□□□□□ -1.26
CIITA-201ENST00000324288 YRDCQ86U90 279 aaKnown RBP7.21□□□□□ -1.26
CIITA-201ENST00000324288 RIMS4Q9H426 269 aaPredicted RBP7.21□□□□□ -1.26
CIITA-201ENST00000324288 FLVCR1Q9Y5Y0 555 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 SCN11AQ9UI33 1791 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 A0A1B0GUL6 1792 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 IGHV3-15A0A0B4J1V0 119 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 K7EQM0 130 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 GLCEO94923 617 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 FAM157BP0CG42 384 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 ZNF17P17021 662 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 TBC1D28Q2M2D7 210 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 TFAP2EQ6VUC0 442 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 WFDC8Q8IUA0 241 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 GPR150Q8NGU9 434 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 KCNG3Q8TAE7 436 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 OR51B4Q9Y5P0 310 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 M0R1B8 84 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 FURINP09958 794 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 RFX2P48378 723 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 RAB1AP62820 205 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 TAZQ16635 292 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 RTL6Q6ICC9 239 aa7.21□□□□□ -1.26
CIITA-201ENST00000324288 ACSM5Q6NUN0 579 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms