RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 MAGT1Q9H0U3 335 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 ESRP2Q9H6T0 727 aaKnown RBP14.84□□□□□ -0.03
CLIP4-201ENST00000320081 ZNF223Q9UK11 482 aaPredicted RBP14.84□□□□□ -0.03
CLIP4-201ENST00000320081 TPPPO94811 219 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 PLA2G7Q13093 441 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 FAM209AQ5JX71 171 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 SPATA46Q5T0L3 261 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 ZNF684Q5T5D7 378 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 SIGIRRQ6IA17 410 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 RNF165Q6ZSG1 346 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 CCDC71LQ8N9Z2 235 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 OTOSQ8NHW6 89 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 BIN3Q9NQY0 253 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 R4GN57 208 aa14.84□□□□□ -0.03
CLIP4-201ENST00000320081 TNFSF11O14788 317 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 CCL11P51671 97 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 TLE1Q04724 770 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 FUT5Q11128 374 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 EDDM3AQ14507 147 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 AADACL3Q5VUY0 350 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 PGAP1Q75T13 922 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 TSPAN32Q96QS1 320 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 SULT4A1Q9BR01 284 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 ZNF2Q9BSG1 426 aaPredicted RBP14.83□□□□□ -0.03
CLIP4-201ENST00000320081 MED18Q9BUE0 208 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 TMPRSS13Q9BYE2 586 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 ZNF286AQ9HBT8 521 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 ISYNA1Q9NPH2 558 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 WIF1Q9Y5W5 379 aa14.83□□□□□ -0.03
CLIP4-201ENST00000320081 FTCDNL1E5RQL4 147 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 H3BP45 60 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 PMS2P2O95744 297 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 ZNF728P0DKX0 622 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 RAC2P15153 192 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 IFITM2Q01629 132 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 ARL6IP1Q15041 203 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 MAML2Q8IZL2 1156 aaPredicted RBP14.83□□□□□ -0.04
CLIP4-201ENST00000320081 PHYHIPQ92561 330 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 LUZP4Q9P127 313 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 ZNF831Q5JPB2 1677 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 RPS10-NUDT3A0A1W2PQS6 291 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 C1orf196B1AJZ1 125 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 APOBEC1P41238 236 aaKnown RBP14.83□□□□□ -0.04
CLIP4-201ENST00000320081 RPS10P46783 165 aaKnown RBP14.83□□□□□ -0.04
CLIP4-201ENST00000320081 OR14K1Q8NGZ2 314 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 OR8B4Q96RC9 309 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 UTP23Q9BRU9 249 aaKnown RBP14.83□□□□□ -0.04
CLIP4-201ENST00000320081 GCM1Q9NP62 436 aa14.83□□□□□ -0.04
CLIP4-201ENST00000320081 TMEM184BQ9Y519 407 aaPredicted RBP14.83□□□□□ -0.04
CLIP4-201ENST00000320081 TRAV8-7A0A075B6U6 113 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 LOC102725191A0A1B0GVB3 256 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 ADAM10O14672 748 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 CD80P33681 288 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 TOR2AQ5JU69 321 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 CCDC74BQ96LY2 380 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 A0A1W2PR80 420 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 BHLHE40O14503 412 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 HSD17B6O14756 317 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 ZNF354AO60765 605 aaPredicted RBP14.82□□□□□ -0.04
CLIP4-201ENST00000320081 RPS4XP62701 263 aaKnown RBP14.82□□□□□ -0.04
CLIP4-201ENST00000320081 RAB11FIP2Q7L804 512 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 TP53BP1Q12888 1972 aaPredicted RBP14.82□□□□□ -0.04
CLIP4-201ENST00000320081 IGHV1OR21-1A0A087WYE8 117 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 MCRIP1C9JLW8 97 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 NME2P1O60361 137 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 IDH3GP51553 393 aaPredicted RBP14.82□□□□□ -0.04
CLIP4-201ENST00000320081 IRF3Q14653 427 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 H3F3CQ6NXT2 135 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 MISPQ8IVT2 679 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 ZNF687Q8N1G0 1237 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 KCNRGQ8N5I3 272 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 ZBTB44Q8NCP5 570 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 OR51F2Q8NH61 342 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 FRZBQ92765 325 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 YIPF5Q969M3 257 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 C4orf45Q96LM5 186 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 CRLF2Q9HC73 371 aa14.82□□□□□ -0.04
CLIP4-201ENST00000320081 MRM2Q9UI43 246 aaKnown RBP14.82□□□□□ -0.04
CLIP4-201ENST00000320081 BOKQ9UMX3 212 aaPredicted RBP14.82□□□□□ -0.04
CLIP4-201ENST00000320081 CYR61O00622 381 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 WDR1O75083 606 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 OR13C7P0DN81 318 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 HLA-DOBP13765 273 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 NME1P15531 152 aaKnown RBP14.81□□□□□ -0.04
CLIP4-201ENST00000320081 ALDH3B1P43353 468 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 TAS2R46P59540 309 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 BDH1Q02338 343 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 OR1N1Q8NGS0 311 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 ABHD5Q8WTS1 349 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 PBDC1Q9BVG4 233 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 A0A0D9SG52 128 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 DCTN6O00399 190 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 SULT1B1O43704 296 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 FAM157BP0CG42 384 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 CCL2P13500 99 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 MSR1P21757 451 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 BCKDHBP21953 392 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 PNLIPRP2P54317 469 aa14.81□□□□□ -0.04
CLIP4-201ENST00000320081 WIPI1Q5MNZ9 446 aaPredicted RBP14.81□□□□□ -0.04
CLIP4-201ENST00000320081 ANKRD16Q6P6B7 361 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms