RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 ZFPL1O95159 310 aa23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 CCL2P13500 99 aa23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 RPS25P62851 125 aaKnown RBP23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 NAA40Q86UY6 237 aa23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 IL17RDQ8NFM7 739 aa23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 OR52H1Q8NGJ2 320 aa23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 RPS4Y2Q8TD47 263 aa23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 OR10A2Q9H208 303 aa23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 KMT2BQ9UMN6 2715 aaPredicted RBP23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 CFAP46Q8IYW2 2715 aa23.82■■□□□ 1.4
CTDNEP1-201ENST00000318988 H3BSA7 217 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 HLA-DPB1P04440 258 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 CELA3BP08861 270 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 UBCP0CG48 685 aaKnown RBP23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 GADD45AP24522 165 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 ELMOD2Q8IZ81 293 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 ITLN2Q8WWU7 325 aaPredicted RBP23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 PPP1R14AQ96A00 147 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 PGLYRP3Q96LB9 341 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 MED18Q9BUE0 208 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 EXOSC4Q9NPD3 245 aaKnown RBP23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 CRNNQ9UBG3 495 aaPredicted RBP23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 STUB1Q9UNE7 303 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 SSR3Q9UNL2 185 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 PCNX1Q96RV3 2341 aa23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 SMG1Q96Q15 3661 aaKnown RBP23.81■■□□□ 1.4
CTDNEP1-201ENST00000318988 CLDN14O95500 239 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 SERPINA3P01011 423 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 ZNF83P51522 516 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 YIF1BQ5BJH7 314 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 TMEM244Q5VVB8 128 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 COMMD2Q86X83 199 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 ANKRD13BQ86YJ7 626 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 OR8B12Q8NGG6 310 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 SLC24A3Q9HC58 644 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 EIF3KQ9UBQ5 218 aaKnown RBP23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 NDRG3Q9UGV2 375 aa23.8■■□□□ 1.4
CTDNEP1-201ENST00000318988 AIREO43918 545 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 C3orf36Q3SXR2 165 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 ZC3HAV1LQ96H79 300 aaKnown RBP23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 SF3B6Q9Y3B4 125 aaKnown RBP23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 LOC100506127A0A0U1RQW1 187 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 M0R1B8 84 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 RGS9O75916 674 aaPredicted RBP23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 IGLV1-44P01699 117 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 CDSNQ15517 529 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 GFOD2Q3B7J2 385 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 PRSS45Q7RTY3 260 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 CHCHD6Q9BRQ6 235 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 OR51E2Q9H255 320 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 ENPP5Q9UJA9 477 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 RALYQ9UKM9 306 aaKnown RBP23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 CEPT1Q9Y6K0 416 aa23.79■■□□□ 1.4
CTDNEP1-201ENST00000318988 A6NHS1 94 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 TTRP02766 147 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 CECR9P0C854 216 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 TMBIM6P55061 237 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 SORDQ00796 357 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 HGFACQ04756 655 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 WFDC8Q8IUA0 241 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 RDH10Q8IZV5 341 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 ABHD4Q8TB40 342 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 APOBEC3DQ96AK3 386 aaPredicted RBP23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 KCNS3Q9BQ31 491 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 C1QTNF5Q9BXJ0 243 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 FAM192AQ9GZU8 254 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 NGBQ9NPG2 151 aa23.78■■□□□ 1.4
CTDNEP1-201ENST00000318988 IGHV1-18A0A0C4DH31 117 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 A0A1B0GVI7 797 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 P2RY10O00398 339 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 ISG15P05161 165 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 ACHEP22303 614 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 MYPOPQ86VE0 399 aaPredicted RBP23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 ZNF420Q8TAQ5 688 aaPredicted RBP23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 OR51E1Q8TCB6 317 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 GPR148Q8TDV2 347 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 RAB2BQ8WUD1 216 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 NAA50Q9GZZ1 169 aaKnown RBP23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 HHLA2Q9UM44 414 aa23.77■■□□□ 1.4
CTDNEP1-201ENST00000318988 NR4A1P22736 598 aa23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 CRYBB2P43320 205 aa23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 FABP5Q01469 135 aa23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 SNAI3Q3KNW1 292 aa23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 UNQ6126/PRO20091Q6UXV3 157 aa23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 GDPGP1Q6ZNW5 385 aa23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 TSEN15Q8WW01 171 aaKnown RBP23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 WFIKKN1Q96NZ8 548 aa23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 GSTK1Q9Y2Q3 226 aa23.76■■□□□ 1.39
CTDNEP1-201ENST00000318988 A0A0U1RQV5 110 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 LOC107986453A0A1B0GWG9 222 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 TRDV1A0A1B0GX56 115 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 SYT7O43581 403 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 GALP22466 123 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 MALLQ13021 153 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 ACSM3Q53FZ2 586 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 PAQR4Q8N4S7 273 aaPredicted RBP23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 OR5L1Q8NGL2 311 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 ZNF319Q9P2F9 582 aa23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 RSL24D1Q9UHA3 163 aaKnown RBP23.75■■□□□ 1.39
CTDNEP1-201ENST00000318988 H3BSH0 61 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms