RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 SFXN4Q6P4A7 337 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 TNFAIP8L1Q8WVP5 186 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 ARL11Q969Q4 196 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 PLA2G12AQ9BZM1 189 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 EGLN3Q9H6Z9 239 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 SPACA1Q9HBV2 294 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 GPN1Q9HCN4 374 aaPredicted RBP13.17□□□□□ -0.3
HOXA3-201ENST00000317201 ICAM5Q9UMF0 924 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 NCOR1O75376 2440 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 A0A087WUJ7 227 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 C9J4A7 227 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 F5H0A9 414 aaPredicted RBP13.17□□□□□ -0.3
HOXA3-201ENST00000317201 RCBTB2O95199 551 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 F10P00742 488 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 PNMTP11086 282 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 RAC2P15153 192 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 RPA2P15927 270 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 ZNF28P17035 718 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 MRPS11P82912 194 aaKnown RBP13.17□□□□□ -0.3
HOXA3-201ENST00000317201 RNLSQ5VYX0 342 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 OR2A2Q6IF42 318 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 OR4F15Q8NGB8 312 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 LIN37Q96GY3 246 aaPredicted RBP13.17□□□□□ -0.3
HOXA3-201ENST00000317201 MESP1Q9BRJ9 268 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 SNHG12Q9BXW3 62 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 TMEM9BQ9NQ34 198 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 MUC3AQ02505 3323 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 PYCARD-AS1I3L0S3 204 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 CPN1P15169 458 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 GPR4P46093 362 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 CD226Q15762 336 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 DCAF12Q5T6F0 453 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 NSUN5P2Q63ZY6 315 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 JMJD6Q6NYC1 403 aaPredicted RBP13.16□□□□□ -0.3
HOXA3-201ENST00000317201 KIRREL2Q6UWL6 708 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 NUP54Q7Z3B4 507 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 SUMF1Q8NBK3 374 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 SEMA6DQ8NFY4 1073 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 ZNF582Q96NG8 517 aaPredicted RBP13.16□□□□□ -0.3
HOXA3-201ENST00000317201 DDA1Q9BW61 102 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 ULBP3Q9BZM4 244 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 CDC42EP2O14613 210 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 NTN1O95631 604 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 CLUP10909 449 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 FABP4P15090 132 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 HNF1AP20823 631 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 NME2P22392 152 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 APLNRP35414 380 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 SLC26A5P58743 744 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 CLN3Q13286 438 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 OR6V1Q8N148 313 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 OR2T33Q8NG76 320 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 GRHL3Q8TE85 626 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 FN3KRPQ9HA64 309 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 TAS2R5Q9NYW4 299 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 FBXL3Q9UKT7 428 aa13.16□□□□□ -0.3
HOXA3-201ENST00000317201 TRAV14DV4A0A0A6YYC5 116 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 UBE2QL1A1L167 161 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 ACOD1A6NK06 481 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 A8MWP6 167 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 C9JQL5 133 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 M0R036 132 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 CA11O75493 328 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 IGHEP01854 428 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 MAKP20794 623 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 GLP1RP43220 463 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 RPS10P46783 165 aaKnown RBP13.15□□□□□ -0.3
HOXA3-201ENST00000317201 MMP15P51511 669 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 PFN4Q8NHR9 129 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 AKR1E2Q96JD6 320 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 MRPS18AQ9NVS2 196 aaKnown RBP13.15□□□□□ -0.3
HOXA3-201ENST00000317201 DOK5Q9P104 306 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 GRHPRQ9UBQ7 328 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 LOXL2Q9Y4K0 774 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 IGHV3-20A0A0C4DH32 117 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 IRGMA1A4Y4 181 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 OR2AT4A6NND4 320 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 LRP3O75074 770 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 KIR3DL2P43630 455 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 PGGHGQ32M88 737 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 C5orf24Q7Z6I8 188 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 OR52I2Q8NH67 350 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 RNF138Q8WVD3 245 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 SPRYD4Q8WW59 207 aaPredicted RBP13.15□□□□□ -0.3
HOXA3-201ENST00000317201 MR1Q95460 341 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 C5orf34Q96MH7 638 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 C20orf141Q9NUB4 165 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 NPFFR2Q9Y5X5 522 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 SEC16AO15027 2179 aa13.15□□□□□ -0.3
HOXA3-201ENST00000317201 PRR33A8MZF0 331 aa13.15□□□□□ -0.31
HOXA3-201ENST00000317201 CRTAPO75718 401 aaPredicted RBP13.15□□□□□ -0.31
HOXA3-201ENST00000317201 ZFAND5O76080 213 aa13.15□□□□□ -0.31
HOXA3-201ENST00000317201 UBL3O95164 117 aa13.15□□□□□ -0.31
HOXA3-201ENST00000317201 SFTPBP07988 381 aa13.15□□□□□ -0.31
HOXA3-201ENST00000317201 PRKXP51817 358 aa13.15□□□□□ -0.31
HOXA3-201ENST00000317201 KHDC3LQ587J8 217 aa13.15□□□□□ -0.31
HOXA3-201ENST00000317201 MUC20Q8N307 709 aaPredicted RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms