RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 NPIPB13A6NJU9 1138 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 NPIPB4C9JG80 1138 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 PRRT4C9JH25 899 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 AGPAT2O15120 278 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 PRH1P02810 166 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 VSIG8P0DPA2 414 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 NR2C1P13056 603 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 RPS10P46783 165 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 METAP1P53582 386 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 MFGE8Q08431 387 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF616Q08AN1 781 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 FUT7Q11130 342 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 STPG1Q5TH74 334 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ARMC6Q6NXE6 501 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 LYPD6Q86Y78 171 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 SGPP2Q8IWX5 399 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 OR4C3Q8NH37 302 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 CD300LFQ8TDQ1 290 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 NXPE3Q969Y0 559 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 WDR92Q96MX6 357 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 RNF186Q9NXI6 227 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 WSB2Q9NYS7 404 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 CGGBP1Q9UFW8 167 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 PISDQ9UG56 409 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 PDE4DIPQ5VU43 2346 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 A0A1B0GTH9 108 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 TLCD2A6NGC4 264 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM14DPA8MWL7 114 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 DCTN6O00399 190 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 SIGLEC5O15389 551 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 OR8U8P0C7N1 319 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 SIGLEC14Q08ET2 396 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 CLINT1Q14677 625 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ACKR1Q16570 336 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF610Q8N9Z0 462 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 PNLDC1Q8NA58 520 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 OR51A4Q8NGJ6 313 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 AKR1E2Q96JD6 320 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 NAA11Q9BSU3 229 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 APOOQ9BUR5 198 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 EIF5A2Q9GZV4 153 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 SPACA1Q9HBV2 294 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 PPP1R14DQ9NXH3 145 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 SERPINE3A8MV23 424 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF20P17024 532 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 AMY2BP19961 511 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 PEBP1P30086 187 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 EBPQ15125 230 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 VITQ6UXI7 678 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 RBMS3Q6XE24 437 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 AVL9Q8NBF6 648 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 RNF133Q8WVZ7 376 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 KTI12Q96EK9 354 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 MBNL1Q9NR56 388 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 GSKIPQ9P0R6 139 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 KIAA1456Q9P272 454 aa4.28□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF346Q9UL40 294 aaKnown RBP4.28□□□□□ -1.72
PTPN13-201ENST00000316707 LOC100509620A0A075B734 347 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 A8MVM7 634 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 PQBP1O60828 265 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 F12P00748 615 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 H2BFMP0C1H6 154 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 DANCRP0C864 163 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 LIPCP11150 499 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 GP1BBP13224 206 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 AFF3P51826 1226 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 OR13C3Q8NGS6 347 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 STT3BQ8TCJ2 826 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 RRNAD1Q96FB5 475 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM59Q9BXS4 323 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ULBP3Q9BZM4 244 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 PRTFDC1Q9NRG1 225 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 LRIT1Q9P2V4 623 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 A0A087WWC5 75 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 A0A0J9YY10 115 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 A6NLC8 198 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 LINC01387J3KSC0 135 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 OIP5O43482 229 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 CTSDP07339 412 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 FCGR2CP31995 323 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 HTR5AP47898 357 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SRPXP78539 464 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 HNF4GQ14541 408 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 AKIRIN2Q53H80 203 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SPACA7Q96KW9 195 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 DGAT2Q96PD7 388 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ARV1Q9H2C2 271 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 FGF22Q9HCT0 170 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 IGLV1-36A0A0B4J1U3 117 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 B4DEV8 164 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ST8SIA3O43173 380 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H1DP16402 221 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF93P35789 620 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 RBP2P50120 134 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF266Q14584 549 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SLC9A3R2Q15599 337 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 AGBL4Q5VU57 503 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 HLA-DQA1Q5Y7H0 255 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 TMPRSS9Q7Z410 1059 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms