RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TCEAL6Q6IPX3 200 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 LIN54Q6MZP7 749 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 TMEM104Q8NE00 496 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 OR51S1Q8NGJ8 323 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 ASB17Q8WXJ9 295 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 TCEAL3Q969E4 200 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 FAM3DQ96BQ1 224 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 OR5B2Q96R09 309 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 ARPC5LQ9BPX5 153 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 TRPC4Q9UBN4 977 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 A0A0A6YYC8 382 aaPredicted RBP6.85□□□□□ -1.31
CNOT4-201ENST00000315544 I3L1I5 382 aaPredicted RBP6.85□□□□□ -1.31
CNOT4-201ENST00000315544 FBXO45P0C2W1 286 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 GRK6P43250 576 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 ID4P47928 161 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 PSMD4P55036 377 aaKnown RBP6.85□□□□□ -1.31
CNOT4-201ENST00000315544 GGNQ86UU5 652 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 OR5AK2Q8NH90 309 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 MALSU1Q96EH3 234 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 IMMP1LQ96LU5 166 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 ULBP3Q9BZM4 244 aa6.85□□□□□ -1.31
CNOT4-201ENST00000315544 SRA1Q9HD15 236 aaKnown RBP6.85□□□□□ -1.31
CNOT4-201ENST00000315544 DYSFO75923 2080 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 A0A1W2PQM1 296 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 KLF7O75840 302 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-201ENST00000315544 UMODP07911 640 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 TACR3P29371 465 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 SUMO3P55854 103 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-201ENST00000315544 PMPCAQ10713 525 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 MADCAM1Q13477 382 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 ERV3-1Q14264 604 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 GK2Q14410 553 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-201ENST00000315544 ELAVL1Q15717 326 aaKnown RBP6.84□□□□□ -1.31
CNOT4-201ENST00000315544 LEG1Q6P5S2 330 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 ANGPTL8Q6UXH0 198 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 MAMDC2Q7Z304 686 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-201ENST00000315544 ANGPTL5Q86XS5 388 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF100Q8IYN0 542 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 COX18Q8N8Q8 333 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 ENKURQ8TC29 256 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 NICN1Q9BSH3 213 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 TPSD1Q9BZJ3 242 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 GP6Q9HCN6 339 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 CRIM1Q9NZV1 1036 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-201ENST00000315544 PMS2P2O95744 297 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 FOLR1P15328 257 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 NAA10P41227 235 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-201ENST00000315544 CENPAP49450 140 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 SLC26A5P58743 744 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 UTS2BQ765I0 119 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 OR5L2Q8NGL0 311 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 OR13G1Q8NGZ3 307 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF417Q8TAU3 575 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 HMGB4Q8WW32 186 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 TMEM106AQ96A25 262 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 TOLLIPQ9H0E2 274 aa6.84□□□□□ -1.31
CNOT4-201ENST00000315544 A0A1W2PPK0 400 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 RAB19A4D1S5 217 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 TLCD2A6NGC4 264 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 BCL2L11O43521 198 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 ZIC3O60481 467 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 RASGRP1O95267 797 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 DUS4LO95620 317 aaKnown RBP6.84□□□□□ -1.32
CNOT4-201ENST00000315544 FGF5P12034 268 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 ARPC4P59998 168 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 GUSBP1Q15486 140 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 MEP1BQ16820 701 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 ALG10Q5BKT4 473 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 OR2W3Q7Z3T1 314 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 OR51D1Q8NGF3 324 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 LILRB1Q8NHL6 650 aaPredicted RBP6.84□□□□□ -1.32
CNOT4-201ENST00000315544 NKX3-1Q99801 234 aaPredicted RBP6.84□□□□□ -1.32
CNOT4-201ENST00000315544 POTEKPQ9BYX7 375 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 SYT4Q9H2B2 425 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 SLCO5A1Q9H2Y9 848 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 IL36GQ9NZH8 169 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 UBQLN2Q9UHD9 624 aa6.84□□□□□ -1.32
CNOT4-201ENST00000315544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 RIIAD1A6NNX1 92 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 OR2T1O43869 369 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 KRT8P05787 483 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 CSF1P09603 554 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 FTH1P19P0C7X4 201 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 TAF12Q16514 161 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 UQCC3Q6UW78 93 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 ENPP7Q6UWV6 458 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 DPY19L4Q7Z388 723 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 HDDC2Q7Z4H3 204 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 KMT5CQ86Y97 462 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 OR52N4Q8NGI2 321 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 ST8SIA2Q92186 375 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 TAAR9Q96RI9 348 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 NELFAQ9H3P2 528 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 WFDC1Q9HC57 220 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 KLHL1Q9NR64 748 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 TAS2R4Q9NYW5 299 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 PQLC2LA1A4F0 135 aa6.83□□□□□ -1.32
CNOT4-201ENST00000315544 OR6C6A6NF89 314 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms