RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 NKD1Q969G9 470 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 FBXW5Q969U6 566 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 MIB2Q96AX9 1013 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 FGGYQ96C11 551 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 CYB5R1Q9UHQ9 305 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 GDF2Q9UK05 429 aaPredicted RBP11.01□□□□□ -0.65
RNF4-201ENST00000314289 KCNMB2Q9Y691 235 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 A0A0J9YW62 118 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 B4E171 279 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 H3BUI4 141 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 SRSF10O75494 262 aaKnown RBP11.01□□□□□ -0.65
RNF4-201ENST00000314289 AVPR2P30518 371 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 TSPAN7P41732 249 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 CCR9P51686 369 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 TAS2R20P59543 309 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 IKZF1Q13422 519 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 RNF144BQ7Z419 303 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 BEST3Q8N1M1 668 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 GTPBP8Q8N3Z3 284 aaPredicted RBP11.01□□□□□ -0.65
RNF4-201ENST00000314289 MEIOBQ8N635 442 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 OR14L1PQ8NHC6 308 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 ZNF837Q96EG3 531 aaPredicted RBP11.01□□□□□ -0.65
RNF4-201ENST00000314289 OXGR1Q96P68 337 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 MFRPQ9BY79 579 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 ACTR6Q9GZN1 396 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 DEPPQ9NTK1 212 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 SESN1Q9Y6P5 492 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 ZFHX2Q9C0A1 2572 aaPredicted RBP11.01□□□□□ -0.65
RNF4-201ENST00000314289 C5orf63A6NC05 138 aa11□□□□□ -0.65
RNF4-201ENST00000314289 AQP7P3A6NL99 342 aa11□□□□□ -0.65
RNF4-201ENST00000314289 ZNF432O94892 652 aa11□□□□□ -0.65
RNF4-201ENST00000314289 ANXA7P20073 488 aaKnown RBP11□□□□□ -0.65
RNF4-201ENST00000314289 ZP3P21754 424 aa11□□□□□ -0.65
RNF4-201ENST00000314289 DLX5P56178 289 aa11□□□□□ -0.65
RNF4-201ENST00000314289 ACER2Q5QJU3 275 aa11□□□□□ -0.65
RNF4-201ENST00000314289 THEM4Q5T1C6 240 aa11□□□□□ -0.65
RNF4-201ENST00000314289 FDX2Q6P4F2 183 aa11□□□□□ -0.65
RNF4-201ENST00000314289 DBX2Q6ZNG2 339 aa11□□□□□ -0.65
RNF4-201ENST00000314289 NAA40Q86UY6 237 aa11□□□□□ -0.65
RNF4-201ENST00000314289 NAXDQ8IW45 347 aa11□□□□□ -0.65
RNF4-201ENST00000314289 UXS1Q8NBZ7 420 aa11□□□□□ -0.65
RNF4-201ENST00000314289 OR6N1Q8NGY5 312 aa11□□□□□ -0.65
RNF4-201ENST00000314289 RNF133Q8WVZ7 376 aa11□□□□□ -0.65
RNF4-201ENST00000314289 FAM3DQ96BQ1 224 aa11□□□□□ -0.65
RNF4-201ENST00000314289 ZBTB8AQ96BR9 441 aa11□□□□□ -0.65
RNF4-201ENST00000314289 HAVCR1Q96D42 359 aa11□□□□□ -0.65
RNF4-201ENST00000314289 SRXN1Q9BYN0 137 aa11□□□□□ -0.65
RNF4-201ENST00000314289 STRADBQ9C0K7 418 aa11□□□□□ -0.65
RNF4-201ENST00000314289 HRASLSQ9HDD0 168 aa11□□□□□ -0.65
RNF4-201ENST00000314289 HHLA2Q9UM44 414 aa11□□□□□ -0.65
RNF4-201ENST00000314289 PINLYPA6NC86 204 aa11□□□□□ -0.65
RNF4-201ENST00000314289 CD2P06729 351 aa11□□□□□ -0.65
RNF4-201ENST00000314289 TAF13Q15543 124 aa11□□□□□ -0.65
RNF4-201ENST00000314289 WIPI1Q5MNZ9 446 aaPredicted RBP11□□□□□ -0.65
RNF4-201ENST00000314289 OR51E1Q8TCB6 317 aa11□□□□□ -0.65
RNF4-201ENST00000314289 FCAMRQ8WWV6 532 aa11□□□□□ -0.65
RNF4-201ENST00000314289 THOC3Q96J01 351 aaKnown RBP11□□□□□ -0.65
RNF4-201ENST00000314289 HES7Q9BYE0 225 aa11□□□□□ -0.65
RNF4-201ENST00000314289 C1orf198Q9H425 327 aa11□□□□□ -0.65
RNF4-201ENST00000314289 CDV3Q9UKY7 258 aaKnown RBP11□□□□□ -0.65
RNF4-201ENST00000314289 FREM1Q5H8C1 2179 aa11□□□□□ -0.65
RNF4-201ENST00000314289 TRAV18A0A075B6X5 111 aa11□□□□□ -0.65
RNF4-201ENST00000314289 TTRP02766 147 aa11□□□□□ -0.65
RNF4-201ENST00000314289 P04436 131 aa11□□□□□ -0.65
RNF4-201ENST00000314289 PRKACAP17612 351 aa11□□□□□ -0.65
RNF4-201ENST00000314289 PSMB1P20618 241 aaKnown RBP11□□□□□ -0.65
RNF4-201ENST00000314289 HSD11B1P28845 292 aa11□□□□□ -0.65
RNF4-201ENST00000314289 MAP1BP46821 2468 aaKnown RBP11□□□□□ -0.65
RNF4-201ENST00000314289 DSCR4P56555 118 aaPredicted RBP11□□□□□ -0.65
RNF4-201ENST00000314289 PSMA6P60900 246 aaKnown RBP11□□□□□ -0.65
RNF4-201ENST00000314289 SLC35A1P78382 337 aa11□□□□□ -0.65
RNF4-201ENST00000314289 NHLRC3Q5JS37 347 aa11□□□□□ -0.65
RNF4-201ENST00000314289 COL27A1Q8IZC6 1860 aaPredicted RBP11□□□□□ -0.65
RNF4-201ENST00000314289 OR2AJ1Q8NGZ0 328 aa11□□□□□ -0.65
RNF4-201ENST00000314289 FAM46BQ96A09 425 aa11□□□□□ -0.65
RNF4-201ENST00000314289 RADILQ96JH8 1075 aa11□□□□□ -0.65
RNF4-201ENST00000314289 RBM24Q9BX46 236 aaKnown RBP11□□□□□ -0.65
RNF4-201ENST00000314289 ATG5Q9H1Y0 275 aa11□□□□□ -0.65
RNF4-201ENST00000314289 ZNF319Q9P2F9 582 aa11□□□□□ -0.65
RNF4-201ENST00000314289 CKLFQ9UBR5 152 aa11□□□□□ -0.65
RNF4-201ENST00000314289 HDGFL3Q9Y3E1 203 aa11□□□□□ -0.65
RNF4-201ENST00000314289 DSPP15924 2871 aaKnown RBP10.99□□□□□ -0.65
RNF4-201ENST00000314289 BET1O15155 118 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 ARPC5O15511 151 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 AQP8O94778 261 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 CALCBP10092 127 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 DLSTP36957 453 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 SPEM2Q0P670 501 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 RAB11BQ15907 218 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 KLHL24Q6TFL4 600 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 SLC25A43Q8WUT9 341 aaPredicted RBP10.99□□□□□ -0.65
RNF4-201ENST00000314289 ROBO4Q8WZ75 1007 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 ADAT3Q96EY9 351 aaPredicted RBP10.99□□□□□ -0.65
RNF4-201ENST00000314289 WBP1Q96G27 269 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 REG4Q9BYZ8 158 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 PBOV1Q9GZY1 135 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 FAM206AQ9NX38 181 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 KLHL9Q9P2J3 617 aa10.99□□□□□ -0.65
RNF4-201ENST00000314289 NPTNQ9Y639 398 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms