RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 KIR2DL3P43628 341 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 LSM5Q9Y4Y9 91 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 ROS1P08922 2347 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 CACNA1GO43497 2377 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 PRAMEF27A3QJZ7 478 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 KNG1P01042 644 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 JMJD7P0C870 316 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 CTSCP53634 463 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 DUSP5Q16690 384 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 PRAMEF9Q5VWM5 478 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 MED25Q71SY5 747 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 LMF1Q96S06 567 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 PRAMEF25A6NGN4 478 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 CD37P11049 281 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 RPL12P30050 165 aaKnown RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 RAC1P63000 192 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 GAB1Q13480 694 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 MEP1BQ16820 701 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 CELF2-AS1Q8N7Q2 184 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 LILRB1Q8NHL6 650 aaPredicted RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 TEX37Q96LM6 180 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ADOQ96SZ5 270 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 RBM24Q9BX46 236 aaKnown RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 SLC35D1Q9NTN3 355 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 TCRBV21S2A2A0A5A6 115 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ABLIM2Q6H8Q1 611 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 NPEPL1Q8NDH3 523 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 GHITMQ9H3K2 345 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 SEC14L6B5MCN3 397 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 PEX11BO96011 259 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FABP5Q01469 135 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 TP53I13Q8NBR0 393 aaPredicted RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 SCLYQ96I15 445 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ADTRPQ96IZ2 230 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 LRRC3BQ96PB8 259 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 IL21RQ9HBE5 538 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 GLRX2Q9NS18 164 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 USP22Q9UPT9 525 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 OR5B21A6NL26 309 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 OR5H8P0DN80 308 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 BLVRBP30043 206 aaPredicted RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 TMEM183BQ1AE95 376 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 GSG1Q2KHT4 349 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 SMIM21Q3B7S5 101 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ORAI1Q96D31 301 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 RTP3Q9BQQ7 232 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 SERPINA7P05543 415 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 CHRNB4P30926 498 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 RNPS1Q15287 305 aaKnown RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 NKPD1Q17RQ9 610 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 MPV17LQ2QL34 196 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 RPUSD3Q6P087 351 aaKnown RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ZFP41Q8N8Y5 198 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 OR5M9Q8NGP3 310 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 NUBPLQ8TB37 319 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 RPS4Y2Q8TD47 263 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 MS4A4AQ96JQ5 239 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 TAAR6Q96RI8 345 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 OCEL1Q9H607 264 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 EP300Q09472 2414 aaPredicted RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 DYSFO75923 2080 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 TRAV27A0A087WT01 109 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A10PA6NDY2 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A18PA6NE21 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A16PA6NEW6 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A20PA6NIJ5 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A8PA6NJQ4 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A7PA6NKC0 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A22PA8MWA6 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A12PA8MX19 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A5PA8MXJ8 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A23PA8MXZ1 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A15PP0C7V4 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A13PP0C7W8 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A14PP0C7W9 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FAM90A24PP0C7X0 464 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 RBPJQ06330 500 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF425Q6IV72 752 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ALKBH2Q6NS38 261 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 CYHR1Q6ZMK1 362 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 CDC20BQ86Y33 519 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 SLC2A8Q9NY64 477 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 PIP5K1CO60331 668 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 FSTP19883 344 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 CAPZBP47756 277 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 HIST1H3AP68431 136 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 PJVKQ0ZLH3 352 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 IL11RAQ14626 422 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 PYCR3Q53H96 274 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 LRRC73Q5JTD7 316 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 OR2G6Q5TZ20 316 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 NHLRC1Q6VVB1 395 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 STXBP6Q8NFX7 210 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 NAA50Q9GZZ1 169 aaKnown RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 TOLLIPQ9H0E2 274 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 HINT3Q9NQE9 182 aaKnown RBP8.01□□□□□ -1.13
COL6A5-202ENST00000312481 LPAR3Q9UBY5 353 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 SIGLEC7Q9Y286 467 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 ADAMTS9Q9P2N4 1935 aa8.01□□□□□ -1.13
COL6A5-202ENST00000312481 A0A1B0GVG6 124 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms