RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 C1QTNF5Q9BXJ0 243 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 GABARAPL3Q9BY60 117 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 RAB1BQ9H0U4 201 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 DDX28Q9NUL7 540 aaKnown RBP10.23□□□□□ -0.77
SCFD1-201ENST00000311943 SLCO1C1Q9NYB5 712 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 NKX1-2Q9UD57 310 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-201ENST00000311943 H3BSH0 61 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 MLNRO43193 412 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 BMP4P12644 408 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 HOXB6P17509 224 aaKnown RBP10.23□□□□□ -0.77
SCFD1-201ENST00000311943 EVX1P49640 407 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 RCN1Q15293 331 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 CLEC9AQ6UXN8 241 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 PRSS45Q7RTY3 260 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 OR2Z1Q8NG97 314 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 OTOSQ8NHW6 89 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 FAM81AQ8TBF8 368 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 TMEM163Q8TC26 289 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 UBASH3BQ8TF42 649 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 EME1Q96AY2 570 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 HAVCR1Q96D42 359 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 MS4A5Q9H3V2 200 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 ELOVL3Q9HB03 270 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF275Q9NSD4 429 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-201ENST00000311943 VSTM5A8MXK1 200 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 E9PQ18 207 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 TPD52L2O43399 206 aaKnown RBP10.22□□□□□ -0.77
SCFD1-201ENST00000311943 RP2O75695 350 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 ALOX5APP20292 161 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 PAICSP22234 425 aaKnown RBP10.22□□□□□ -0.77
SCFD1-201ENST00000311943 PEX2P28328 305 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 OPRL1P41146 370 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 NR4A2P43354 598 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 CX3CR1P49238 355 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 ALDH3A2P51648 485 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF121P58317 390 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-201ENST00000311943 TEX30Q5JUR7 227 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 FAM201AQ5SY85 155 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 ZFP1Q6P2D0 407 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 FAM57BQ71RH2 274 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF283Q8N7M2 679 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 C19orf18Q8NEA5 215 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 OR51G2Q8NGK0 314 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF420Q8TAQ5 688 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-201ENST00000311943 RNF133Q8WVZ7 376 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 RBM4BQ9BQ04 359 aaKnown RBP10.22□□□□□ -0.77
SCFD1-201ENST00000311943 ADGRL4Q9HBW9 690 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 AMBNQ9NP70 447 aa10.22□□□□□ -0.77
SCFD1-201ENST00000311943 F5H5P2 479 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 PRODHO43272 600 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 TBX1O43435 398 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 PNPP00491 289 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 ANPEPP15144 967 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 MVKQ03426 396 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 RIN1Q13671 783 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 TAF13Q15543 124 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 MEPCEQ7L2J0 689 aaKnown RBP10.21□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF786Q8N393 782 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 CCL17Q92583 94 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 APOBEC3DQ96AK3 386 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-201ENST00000311943 SGK3Q96BR1 496 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF582Q96NG8 517 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-201ENST00000311943 KCNJ15Q99712 375 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 APOL4Q9BPW4 351 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 BARX1Q9HBU1 254 aaPredicted RBP10.21□□□□□ -0.77
SCFD1-201ENST00000311943 LRP12Q9Y561 859 aa10.21□□□□□ -0.77
SCFD1-201ENST00000311943 ARHGAP32A7KAX9 2087 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 ZNF878C9JN71 531 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 INAFM1C9JVW0 142 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 TMCC2O75069 709 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 ANXA2P07355 339 aaKnown RBP10.21□□□□□ -0.78
SCFD1-201ENST00000311943 LYNP07948 512 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 TPTEP56180 551 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 CXCR4P61073 352 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 MFGE8Q08431 387 aaPredicted RBP10.21□□□□□ -0.78
SCFD1-201ENST00000311943 ZBTB49Q6ZSB9 765 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 ITLN1Q8WWA0 313 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 LYZL4Q96KX0 146 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 WACQ9BTA9 647 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 LPAR2Q9HBW0 351 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 USE1Q9NZ43 259 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 MALRD1Q5VYJ5 2156 aa10.21□□□□□ -0.78
SCFD1-201ENST00000311943 NSD1Q96L73 2696 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-201ENST00000311943 ENTPD6O75354 484 aa10.2□□□□□ -0.78
SCFD1-201ENST00000311943 PDLIM4P50479 330 aa10.2□□□□□ -0.78
SCFD1-201ENST00000311943 SMN1Q16637 294 aaKnown RBP10.2□□□□□ -0.78
SCFD1-201ENST00000311943 TMEM249Q2WGJ8 235 aa10.2□□□□□ -0.78
SCFD1-201ENST00000311943 NXNL2Q5VZ03 156 aa10.2□□□□□ -0.78
SCFD1-201ENST00000311943 FBXW12Q6X9E4 464 aa10.2□□□□□ -0.78
SCFD1-201ENST00000311943 NEU4Q8WWR8 484 aaPredicted RBP10.2□□□□□ -0.78
SCFD1-201ENST00000311943 DNAJC9Q8WXX5 260 aa10.2□□□□□ -0.78
SCFD1-201ENST00000311943 ELMOD3Q96FG2 381 aa10.2□□□□□ -0.78
SCFD1-201ENST00000311943 LOC390937A0A1W2PQ73 354 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 PLSCR5A0PG75 271 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 A6NIN4 97 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 H2BFMP0C1H6 154 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 KITLGP21583 273 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 CA6P23280 308 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 HSD11B1P28845 292 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 PMELP40967 661 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms