RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 OR2AJ1Q8NGZ0 328 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 MEGF10Q96KG7 1140 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 GAL3ST1Q99999 423 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 CMC2Q9NRP2 79 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 TCRBV3S1A0A5B6 114 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 F5H0A9 414 aaPredicted RBP16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 TMEM178BH3BS89 294 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 M0R135 149 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 PNPP00491 289 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 CST1P01037 141 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 SELEP16581 610 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 PMELP40967 661 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 RASSF2P50749 326 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 MAB21L1Q13394 359 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 LRRC28Q86X40 367 aaPredicted RBP16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 BHLHE23Q8NDY6 225 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 OR13G1Q8NGZ3 307 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 GIPC3Q8TF64 312 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 SLCO4A1Q96BD0 722 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 ZNF799Q96GE5 643 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 CDADC1Q9BWV3 514 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 OPN4Q9UHM6 478 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 PPP1R3CQ9UQK1 317 aa16.67■□□□□ 0.26
PDZRN3-202ENST00000308537 F5H5P2 479 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 ATP5HO75947 161 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 FSHBP01225 129 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 ANPEPP15144 967 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 ZNF823P16415 610 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 TNFSF4P23510 183 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 ENTPD1P49961 510 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 SEC61A1P61619 476 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 TMEM155Q4W5P6 130 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 ZNF771Q7L3S4 317 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 DCXRQ7Z4W1 244 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 RFLNBQ8N5W9 214 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 PAPD5Q8NDF8 572 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 ZNF420Q8TAQ5 688 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 ZNF582Q96NG8 517 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 MED20Q9H944 212 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 MARCH7Q9H992 704 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 PATZ1Q9HBE1 687 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 POMPQ9Y244 141 aa16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 POLR3KQ9Y2Y1 108 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-202ENST00000308537 TENM1Q9UKZ4 2725 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 LOC105371242A0A075B767 164 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 FAM183AA6NL82 134 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 LCATP04180 440 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 HLA-DPB1P04440 258 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 HOXB6P17509 224 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 GRK5P34947 590 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 SRP14P37108 136 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 GATA4P43694 442 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 RAD23AP54725 363 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 TPTEP56180 551 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 BTG1P62324 171 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 ZNF92Q03936 586 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 FAHD2BQ6P2I3 314 aaPredicted RBP16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 ATG16L2Q8NAA4 619 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 FAHD2AQ96GK7 314 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 AMELYQ99218 206 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 REPIN1Q9BWE0 567 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 METTL17Q9H7H0 456 aaPredicted RBP16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 NTN4Q9HB63 628 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 UBAP1Q9NZ09 502 aa16.65■□□□□ 0.26
PDZRN3-202ENST00000308537 PPIAL4EA0A075B759 164 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 PPIAL4CA0A0B4J2A2 164 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 ISPDA4D126 451 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 A8MXK9 166 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 PPIAL4DF5H284 164 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 ZNF593O00488 134 aaPredicted RBP16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 SURF4O15260 269 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 PTBP3O95758 552 aaKnown RBP16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 SBK2P0C263 348 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 PPIAL4FP0DN26 164 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 FMO3P31513 532 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 ZNF181Q2M3W8 571 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 TUSC1Q2TAM9 212 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 SLC27A4Q6P1M0 643 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 PRSS45Q7RTY3 260 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 SEMA6DQ8NFY4 1073 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 OR2AE1Q8NHA4 323 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 SLAMF6Q96DU3 332 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 C19orf24Q9BVV8 132 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 CADM1Q9BY67 442 aaKnown RBP16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 TMEM165Q9HC07 324 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 MMP26Q9NRE1 261 aa16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 PDP1Q9P0J1 537 aaPredicted RBP16.64■□□□□ 0.25
PDZRN3-202ENST00000308537 A0A0G2JMP0 313 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 IGHV3-64DA0A0J9YX35 117 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 A0A0X1KG70 313 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 TRAPPC2LH3BP13 241 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 FKBP6O75344 327 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 SPARCP09486 303 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 SLC6A9P48067 706 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 LCN2P80188 198 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 FLOT2Q14254 428 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 GLYATL3Q5SZD4 288 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 DRAM2Q6UX65 266 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 C1QL2Q7Z5L3 287 aa16.63■□□□□ 0.25
PDZRN3-202ENST00000308537 PEG10Q86TG7 708 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms