RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 A0A0A6YYJ9 748 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 CEACAM16Q2WEN9 425 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 NEURL2Q9BR09 285 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 POFUT1Q9H488 388 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 CD3DP04234 171 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 DBPQ10586 325 aaPredicted RBP10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 MESTQ5EB52 335 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 FBLIM1Q8WUP2 373 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 CPNE4Q96A23 557 aaPredicted RBP10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 CMTM3Q96MX0 182 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 DDOQ99489 341 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 FLVCR2Q9UPI3 526 aa10.25□□□□□ -0.77
PCDHGC3-201ENST00000308177 VWA8A3KMH1 1905 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 CNOT1A5YKK6 2376 aaKnown RBP10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 TIMM8AO60220 97 aaPredicted RBP10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZNF728P0DKX0 622 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 TNFSF4P23510 183 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 RGS19P49795 217 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 ACSM1Q08AH1 577 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 TBC1D28Q2M2D7 210 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 OGFOD3Q6PK18 319 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 ADGRG3Q86Y34 549 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZNF721Q8TF20 911 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 ARL11Q969Q4 196 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 C1orf123Q9NWV4 160 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 COPS3Q9UNS2 423 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 R4GN57 208 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 OIP5O43482 229 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 PPP3CBP16298 524 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 RPS18P62269 152 aaKnown RBP10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 SSPNQ14714 243 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 ALKAL2Q6UX46 152 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 CREB3L2Q70SY1 520 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR51A2Q8NGJ7 313 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 SECTM1Q8WVN6 248 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 HINT2Q9BX68 163 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 MRM2Q9UI43 246 aaKnown RBP10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 TRAPPC2LQ9UL33 140 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 TPRP12270 2363 aaKnown RBP10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 CD300LBA8K4G0 201 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 PTP4A3O75365 173 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 LALBAP00709 142 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 STARD6P59095 220 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 ETFDHQ16134 617 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 PMS2CLQ68D20 193 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 LAIR1Q6GTX8 287 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 HAGHLQ6PII5 290 aaPredicted RBP10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 MAMSTRQ6ZN01 415 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 SLC25A45Q8N413 288 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 KCNJ15Q99712 375 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 FAM173AQ9BQD7 235 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 RAB33BQ9H082 229 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 A0A1B0GV50 99 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 C4orf47A7E2U8 309 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 SULT1C2O00338 296 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 NRASP01111 189 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 SERPINA7P05543 415 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 MFGE8Q08431 387 aaPredicted RBP10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 VHLLQ6RSH7 139 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 DTWD2Q8NBA8 298 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR51F2Q8NH61 342 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 GLYATL2Q8WU03 294 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 SMIM3Q9BZL3 60 aa10.24□□□□□ -0.77
PCDHGC3-201ENST00000308177 DSPPQ9NZW4 1301 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 THSD7BQ9C0I4 1608 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 TMEM200CA6NKL6 621 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 LINC01387J3KSC0 135 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 RER1O15258 196 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 OGG1O15527 345 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 NXPH2O95156 264 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 RAD52P43351 418 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 MECP2P51608 486 aaKnown RBP10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR1C1Q15619 314 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 CLPPQ16740 277 aaPredicted RBP10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 DMRTC1Q5HYR2 192 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 MDGA2Q7Z553 956 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 REEP6Q96HR9 211 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 OCSTAMPQ9BR26 566 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 NELFAQ9H3P2 528 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 CRLF2Q9HC73 371 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 RAB9BQ9NP90 201 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 LANCL2Q9NS86 450 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 PLA2G3Q9NZ20 509 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR6C6A6NF89 314 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 MPZL1O95297 269 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 TSPAN15O95858 294 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 CTSBP07858 339 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 RFX2P48378 723 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 FOXL2P58012 376 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 RAC1P63000 192 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 WDR5BQ86VZ2 330 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 TMEM185AQ8NFB2 350 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 AKR7LQ8NHP1 331 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 SCN2AQ99250 2005 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 FOXB1Q99853 325 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZFP64Q9NPA5 681 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 DUSP13Q9UII6 198 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 C5orf49A4QMS7 147 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 POM121CA8CG34 1229 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 XRCC2O43543 280 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms