RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FAM57AQ8TBR7 257 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SNRNP40Q96DI7 357 aaKnown RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 GFI1Q99684 422 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 OR2H1Q9GZK4 316 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 PBOV1Q9GZY1 135 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 NIPAL2Q9H841 368 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 NOX3Q9HBY0 568 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 AKIP1Q9NQ31 210 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 PLEK2Q9NYT0 353 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF319Q9P2F9 582 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 NUFIP1Q9UHK0 495 aaKnown RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 A0A075B6Q4 140 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 TRAV1-2A0A0B4J238 106 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 LOC107986453A0A1B0GWG9 222 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 OR6C6A6NF89 314 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ANKRD61A6NGH8 418 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 P2RY10O00398 339 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SGCEO43556 437 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 LMX1BO60663 402 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 TNFSF13O75888 250 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ACSM4P0C7M7 580 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 OCM2P0CE71 109 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ABOP16442 354 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MYL9P24844 172 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MPGP29372 298 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 PSG4Q00888 419 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 GALK2Q01415 458 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 HGFACQ04756 655 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MOGQ16653 247 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 KRTAP27-1Q3LI81 207 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 HSD17B12Q53GQ0 312 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 CEP78Q5JTW2 689 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SFRP5Q5T4F7 317 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 C1orf185Q5T7R7 199 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 BCL2L15Q5TBC7 163 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ASPHD2Q6ICH7 369 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 PAMR1Q6UXH9 720 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 C3P1Q6ZMU1 363 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ELMOD2Q8IZ81 293 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF283Q8N7M2 679 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 CNEP1R1Q8N9A8 125 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 NAXEQ8NCW5 288 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 OR8B12Q8NGG6 310 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 GPR148Q8TDV2 347 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 KCNJ15Q99712 375 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SOX7Q9BT81 388 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 C6orf62Q9GZU0 229 aaPredicted RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SLC25A18Q9H1K4 315 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MMP27Q9H306 513 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ASF1BQ9NVP2 202 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 A3GALT2U3KPV4 340 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 TRAV8-7A0A075B6U6 113 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 A0A1B0GTI1 187 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 IQCMA0A1B0GVH7 501 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 F5H5K5 113 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 CTDSP2O14595 271 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 WDR1O75083 606 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ARL6IP5O75915 188 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 FARS2O95363 451 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 HLA-HP01893 362 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ISG15P05161 165 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 GABRA1P14867 456 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 SRMP19623 302 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ACHEP22303 614 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 IGHV1-2P23083 117 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 IFITM3Q01628 133 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 SCRN3Q0VDG4 424 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 SLC25A35Q3KQZ1 300 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 OR2A2Q6IF42 318 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF544Q6NX49 715 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 OR1K1Q8NGR3 316 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 OR6K3Q8NGY3 331 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 OR1F12Q8NHA8 337 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 TSEN15Q8WW01 171 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ASB5Q8WWX0 329 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 PHYHIPQ92561 330 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 TMEM106AQ96A25 262 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 SLC30A2Q9BRI3 323 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 HDHD2Q9H0R4 259 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 MOB1AQ9H8S9 216 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 SMURF1Q9HCE7 757 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 SLC17A5Q9NRA2 495 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 TIMM10BQ9Y5J6 103 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 N6AMT1Q9Y5N5 214 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ZFHX3Q15911 3703 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 FIGNL2A6NMB9 653 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 M0R135 149 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 CGAP01215 116 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ANXA2P07355 339 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 UBCP0CG48 685 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ADRA2CP18825 462 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 RAB3BP20337 219 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 MAPK3P27361 379 aaPredicted RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 THBS2P35442 1172 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 PCBD1P61457 104 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 DYNC1I2Q13409 638 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 DCTN2Q13561 401 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 HIKESHIQ53FT3 197 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 PABPC1L2AQ5JQF8 200 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF704Q6ZNC4 412 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms