RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NAT2P11245 290 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RAC2P15153 192 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ALOX5APP20292 161 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OPRL1P41146 370 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PDLIM4P50479 330 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RIDAP52758 137 aaKnown RBP9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DSCR9P59020 149 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SNRPGP62308 76 aaKnown RBP9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 IL5RAQ01344 420 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PSG7Q13046 419 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CARTPTQ16568 116 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TIGD6Q17RP2 521 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PCGF3Q3KNV8 242 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TTC23Q5W5X9 447 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LRRN1Q6UXK5 716 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 FBXW12Q6X9E4 464 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 COLCA1Q6ZS62 124 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PGAP1Q75T13 922 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TGIF2LYQ8IUE0 185 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DHRSXQ8N5I4 330 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SETD9Q8NE22 299 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 WFDC11Q8NEX6 87 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CMBLQ96DG6 245 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PGAM5Q96HS1 289 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RHNO1Q9BSD3 238 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ADGRL4Q9HBW9 690 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 BRD7Q9NPI1 651 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PURGQ9UJV8 347 aaKnown RBP9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LRP12Q9Y561 859 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CSMD1Q96PZ7 3565 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MYO9AB2RTY4 2548 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LRBAP50851 2863 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 E9PQ18 207 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PSMD9O00233 223 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SPRY3O43610 288 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ENTPD6O75354 484 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR2T7P0C7T2 308 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC2A1P11166 492 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 KITLGP21583 273 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TNFSF4P23510 183 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MTNR1AP48039 350 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 HCCSP53701 268 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF121P58317 390 aaPredicted RBP9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PSMA6P60900 246 aaKnown RBP9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CXCR4P61073 352 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ACTC1P68032 377 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ACTA1P68133 377 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OCLNQ16625 522 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RSPO1Q2MKA7 263 aaPredicted RBP9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF829Q3KNS6 432 aaPredicted RBP9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SNAI3Q3KNW1 292 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC25A30Q5SVS4 291 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DEGS2Q6QHC5 323 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF322Q6U7Q0 402 aaPredicted RBP9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 USP51Q70EK9 711 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 FAM57BQ71RH2 274 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 FAM220AQ7Z4H9 259 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NAA40Q86UY6 237 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 KRTAP1-3Q8IUG1 177 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ENTHD1Q8IYW4 607 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR5AS1Q8N127 324 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZCCHC24Q8N2G6 241 aaKnown RBP9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF525Q8N782 197 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR10H4Q8NGA5 316 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR52H1Q8NGJ2 320 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR2T27Q8NH04 317 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 FAM168AQ92567 244 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 HAVCR1Q96D42 359 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR8B4Q96RC9 309 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DIRC2Q96SL1 478 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 AMELYQ99218 206 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TBX5Q99593 518 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PIMREGQ9BSJ6 248 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR10A2Q9H208 303 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SAP30LQ9HAJ7 183 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 COPS3Q9UNS2 423 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 KLHDC2Q9Y2U9 406 aa9.4□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CCDC168Q8NDH2 2452 aa9.4□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CR1P17927 2039 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GGT3PA6NGU5 568 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 IQCF6A8MYZ5 107 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF254O75437 659 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 LY6HO94772 140 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 APOL3O95236 402 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 KRT8P05787 483 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DAOP14920 347 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CFL1P23528 166 aaKnown RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CAPGP40121 348 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MMP15P51511 669 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 EGR3Q06889 387 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GK2Q14410 553 aaPredicted RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 HLXQ14774 488 aaPredicted RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TSTQ16762 297 aaKnown RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GFOD2Q3B7J2 385 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 FAM209AQ5JX71 171 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GLYATL3Q5SZD4 288 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF691Q5VV52 312 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR2T2Q6IF00 324 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF679Q8IYX0 411 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms