RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TFF2Q03403 129 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 VAX1Q5SQQ9 334 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 HIST2H3PS2Q5TEC6 136 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 MYO7BQ6PIF6 2116 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 IL34Q6ZMJ4 242 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 HIST2H3AQ71DI3 136 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 RAB11FIP2Q7L804 512 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 TMEM151BQ8IW70 566 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZNF679Q8IYX0 411 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZNF295-AS1Q8N0V1 137 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 FAM160A2Q8N612 972 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 APCDD1LQ8NCL9 501 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 OR1M1Q8NGA1 313 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 GPR119Q8TDV5 335 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 INTS12Q96CB8 462 aaKnown RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 KCNK17Q96T54 332 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 MRPL13Q9BYD1 178 aaKnown RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 SLC26A1Q9H2B4 701 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 WFDC1Q9HC57 220 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 GPN1Q9HCN4 374 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 ADAP2Q9NPF8 381 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 HRASLS2Q9NWW9 162 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZNF319Q9P2F9 582 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 PFDN2Q9UHV9 154 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 FXYD6-FXYD2A0A087WZ82 144 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 C5orf63A6NC05 138 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 NUDT19A8MXV4 375 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 MS4A18H0YCH9 400 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 RBBP9O75884 186 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 VSIG8P0DPA2 414 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 MMP16P51512 607 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZNF121P58317 390 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 TAS2R19P59542 299 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 FOXK1P85037 733 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 HSF1Q00613 529 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZFP36L1Q07352 338 aaKnown RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 RSPO1Q2MKA7 263 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 MS4A18Q3C1V0 323 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 FAM209BQ5JX69 171 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 OTPQ5XKR4 325 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 LEG1Q6P5S2 330 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 PLPP7Q8NBV4 271 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 OR9A4Q8NGU2 314 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 MARS2Q96GW9 593 aaKnown RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 DGAT2Q96PD7 388 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 POTEKPQ9BYX7 375 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 FXYD6Q9H0Q3 95 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 MBD2Q9UBB5 411 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 HDGFL3Q9Y3E1 203 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 LRP12Q9Y561 859 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ATG2BQ96BY7 2078 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 GTF3C1Q12789 2109 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 PRSS37A4D1T9 235 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 VSTM2BA6NLU5 285 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 FAM25EA8MYX2 175 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 MFNGO00587 321 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 CLDN4O14493 209 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 CLN5O75503 358 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 CSTAP01040 98 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 MAS1P04201 325 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 GIMD1P0DJR0 217 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 PGAM2P15259 253 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 CTLA4P16410 223 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZNF708P17019 499 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 IL11P20809 199 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 CEACAM6P40199 344 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ID4P47928 161 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 SULT1A2P50226 295 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 SUCLG1P53597 346 aaKnown RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 F2RL1P55085 397 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZNF117Q03924 483 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 PJVKQ0ZLH3 352 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ELOCQ15369 112 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZNF385CQ66K41 422 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 C9orf40Q8IXQ3 194 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 NKAIN3Q8N8D7 197 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 SLC26A10Q8NG04 563 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ST8SIA1Q92185 356 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 FOXRED1Q96CU9 486 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 POM121Q96HA1 1249 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 OCSTAMPQ9BR26 566 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 UQCC2Q9BRT2 126 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 SPRTNQ9H040 489 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 LPAR5Q9H1C0 372 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 SAV1Q9H4B6 383 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 CNTD2Q9H8S5 307 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZFP57Q9NU63 452 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 TAS2R4Q9NYW5 299 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ZNF629Q9UEG4 869 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 GPN3Q9UHW5 284 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 TNRC18O15417 2968 aaPredicted RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 IGKV1D-8A0A087WSZ0 117 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 ANKUB1A6NFN9 424 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 H7C1C5 153 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 SOX1O00570 391 aaPredicted RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 NDUFS6O75380 124 aaKnown RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 KHDRBS3O75525 346 aaKnown RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 WISP2O76076 250 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 IGHG1P01857 330 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 CSTBP04080 98 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms