RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 NTF4P34130 210 aa12.77□□□□□ -0.37
SHCBP1-201ENST00000303383 TMEM69Q5SWH9 247 aa12.77□□□□□ -0.37
SHCBP1-201ENST00000303383 C9orf135Q5VTT2 229 aa12.77□□□□□ -0.37
SHCBP1-201ENST00000303383 FOXL2NBQ6ZUU3 175 aa12.77□□□□□ -0.37
SHCBP1-201ENST00000303383 OR51D1Q8NGF3 324 aa12.77□□□□□ -0.37
SHCBP1-201ENST00000303383 APH1AQ96BI3 265 aa12.77□□□□□ -0.37
SHCBP1-201ENST00000303383 RNF121Q9H920 327 aa12.77□□□□□ -0.37
SHCBP1-201ENST00000303383 PCDHGA9Q9Y5G4 932 aaKnown RBP12.77□□□□□ -0.37
SHCBP1-201ENST00000303383 ZNF587BE7ETH6 402 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 M0R135 149 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 SPNP16150 400 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 TSPO2Q5TGU0 170 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 ZNF799Q96GE5 643 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 C11orf54Q9H0W9 315 aaPredicted RBP12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 PNRC2Q9NPJ4 139 aaKnown RBP12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 FAM240BA0A1B0GVZ2 78 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 OR6C65A6NJZ3 312 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 CST2P09228 141 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 FSTP19883 344 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 SLC7A6Q92536 515 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 FBXO17Q96EF6 278 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 DDX28Q9NUL7 540 aaKnown RBP12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 KCNMB2Q9Y691 235 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 IGKV3D-15A0A087WSY6 115 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 CENPXA8MT69 81 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 SLC17A2O00624 439 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 LMX1BO60663 402 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 YES1P07947 543 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 RAB3AP20336 220 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 HTR2CP28335 458 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 MAP2K3P46734 347 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 TPTEP56180 551 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 CTAG1AP78358 180 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 RNFT1Q5M7Z0 435 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 GLYATL3Q5SZD4 288 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 SLC22A24Q8N4F4 322 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 NKAIN3Q8N8D7 197 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 ABHD1Q96SE0 405 aa12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 CGGBP1Q9UFW8 167 aaPredicted RBP12.76□□□□□ -0.37
SHCBP1-201ENST00000303383 BDKRB2P30411 391 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 HTR5AP47898 357 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 POU3F4P49335 361 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 RAB35Q15286 201 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 DOK3Q7L591 496 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 OR51A2Q8NGJ7 313 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 OR13C9Q8NGT0 318 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 FAM3DQ96BQ1 224 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 DIABLOQ9NR28 239 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 TIMM10BQ9Y5J6 103 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 SLC22A20A6NK97 555 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 LYRM1O43325 122 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 SSX4O60224 188 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 ZNF32P17041 273 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 ECH1Q13011 328 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 PLET1Q6UQ28 207 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 TOMM5Q8N4H5 51 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 FOXRED1Q96CU9 486 aaPredicted RBP12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 NKX3-1Q99801 234 aaPredicted RBP12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 ERCC1P07992 297 aaPredicted RBP12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 ITGA5P08648 1049 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 PATE4P0C8F1 98 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 ARSBP15848 533 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 OR6M1Q8NGM8 313 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 OR1J2Q8NGS2 313 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 ZDHHC11Q9H8X9 412 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 SLC7A10Q9NS82 523 aa12.75□□□□□ -0.37
SHCBP1-201ENST00000303383 CD3GP09693 182 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 SCAND1P57086 179 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 RSBN1Q5VWQ0 802 aaPredicted RBP12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 ZNF774Q6NX45 483 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 OR1M1Q8NGA1 313 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 AKR7LQ8NHP1 331 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 OR10A2Q9H208 303 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 C12orf49Q9H741 205 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 TMEM138Q9NPI0 162 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 LOC100289279A0A1B0GTE1 492 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 DBHP09172 617 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 FCGR2AP12318 317 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 CARTPTQ16568 116 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 C15orf40Q8WUR7 153 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 SORCS2Q96PQ0 1159 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 ZNF724A8MTY0 619 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 LCATP04180 440 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 FAPQ12884 760 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 C2orf76Q3KRA6 126 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 PRSS45Q7RTY3 260 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 NAA40Q86UY6 237 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 OR1F12Q8NHA8 337 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 HAVCR1Q96D42 359 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 SLC25A38Q96DW6 304 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 ADAT3Q96EY9 351 aaPredicted RBP12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 WDYHV1Q96HA8 205 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 GAL3ST1Q99999 423 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 ABCG5Q9H222 651 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 ITGB1BP2Q9UKP3 347 aa12.74□□□□□ -0.37
SHCBP1-201ENST00000303383 ADRB1P08588 477 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 HCKP08631 526 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms