RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 FOLR1P15328 257 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 GFOD2Q3B7J2 385 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.04□□□□□ -0.48
CTDP1-202ENST00000299543 GABRG1Q8N1C3 465 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 GALNT16Q8N428 558 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 OR1L3Q8NH93 324 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 MCHR2Q969V1 340 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 ISOC2Q96AB3 205 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 SPACA5Q96QH8 159 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 C20orf24Q9BUV8 137 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 LMAN1LQ9HAT1 526 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 OR2S2Q9NQN1 319 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 TAS2R8Q9NYW2 309 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 NOP16Q9Y3C1 178 aaKnown RBP12.04□□□□□ -0.48
CTDP1-202ENST00000299543 MRPS18BQ9Y676 258 aaKnown RBP12.04□□□□□ -0.48
CTDP1-202ENST00000299543 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 SLC17A2O00624 439 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 TXNDC12O95881 172 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 IFI6P09912 130 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 SMIM6P0DI80 62 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 FASLGP48023 281 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 DHODHQ02127 395 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 POU3F1Q03052 451 aaPredicted RBP12.04□□□□□ -0.48
CTDP1-202ENST00000299543 GLO1Q04760 184 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 SSX2Q16385 188 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 PDZD11Q5EBL8 140 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 BEST3Q8N1M1 668 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 SPICQ8N5J4 248 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 EIF4E3Q8N5X7 224 aaKnown RBP12.04□□□□□ -0.48
CTDP1-202ENST00000299543 CASTOR1Q8WTX7 329 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 ASB5Q8WWX0 329 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 ZFP57Q9NU63 452 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 COMMD9Q9P000 198 aa12.04□□□□□ -0.48
CTDP1-202ENST00000299543 LOC101059948A0A1B0GTJ6 334 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 SNRPGP15A8MWD9 76 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 NPIPA5E9PKD4 350 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 IFNA4P05014 189 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 MPGP29372 298 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 P2RY4P51582 365 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 DMWDQ09019 674 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 ELAVL1Q15717 326 aaKnown RBP12.03□□□□□ -0.48
CTDP1-202ENST00000299543 MOGAT2Q3SYC2 334 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 CDNFQ49AH0 187 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 OR2W3Q7Z3T1 314 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 RPS4Y2Q8TD47 263 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 WWTR1Q9GZV5 400 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 SEC61A2Q9H9S3 476 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 UFSP2Q9NUQ7 469 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 ZNF629Q9UEG4 869 aaPredicted RBP12.03□□□□□ -0.48
CTDP1-202ENST00000299543 NPIPA1Q9UND3 350 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 POLR1DQ9Y2S0 133 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 BLACEA4D250 179 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 IL5P05113 134 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 PRF1P14222 555 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 CPN1P15169 458 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 NME1P15531 152 aaKnown RBP12.03□□□□□ -0.48
CTDP1-202ENST00000299543 GABRA4P48169 554 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 FAM219AQ8IW50 185 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 RNF128Q8TEB7 428 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 PIGQQ9BRB3 760 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 DUSP15Q9H1R2 295 aaPredicted RBP12.03□□□□□ -0.48
CTDP1-202ENST00000299543 TXNIPQ9H3M7 391 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 UNKLQ9H9P5 680 aaKnown RBP12.03□□□□□ -0.48
CTDP1-202ENST00000299543 APMAPQ9HDC9 416 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
CTDP1-202ENST00000299543 TMEM82A0PJX8 343 aa12.02□□□□□ -0.48
CTDP1-202ENST00000299543 PHYHO14832 338 aa12.02□□□□□ -0.48
CTDP1-202ENST00000299543 GATCO43716 136 aaKnown RBP12.02□□□□□ -0.48
CTDP1-202ENST00000299543 POLR2HP52434 150 aaKnown RBP12.02□□□□□ -0.48
CTDP1-202ENST00000299543 SGCBQ16585 318 aa12.02□□□□□ -0.48
CTDP1-202ENST00000299543 BPIFB2Q8N4F0 458 aa12.02□□□□□ -0.48
CTDP1-202ENST00000299543 FGGYQ96C11 551 aa12.02□□□□□ -0.48
CTDP1-202ENST00000299543 SSX3Q99909 188 aa12.02□□□□□ -0.48
CTDP1-202ENST00000299543 PHF3Q92576 2039 aaKnown RBP12.02□□□□□ -0.49
CTDP1-202ENST00000299543 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 LOC107986453A0A1B0GWG9 222 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 A8MVM7 634 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 IGKV3-11P04433 115 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 GP1BAP07359 652 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 GUSBP08236 651 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 SLC2A1P11166 492 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 ZNF44P15621 663 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 PRKXP51817 358 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 ASPHD2Q6ICH7 369 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 SLC36A1Q7Z2H8 476 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 GTPBP8Q8N3Z3 284 aaPredicted RBP12.02□□□□□ -0.49
CTDP1-202ENST00000299543 NUBPLQ8TB37 319 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 LIPHQ8WWY8 451 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 VN1R1Q9GZP7 353 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 RASL12Q9NYN1 266 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 SUSD2Q9UGT4 822 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 HHLA2Q9UM44 414 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 FRYLO94915 3013 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 ZNF736B4DX44 427 aaPredicted RBP12.02□□□□□ -0.49
CTDP1-202ENST00000299543 H2BFMP0C1H6 154 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 DAOP14920 347 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 RAB2AP61019 212 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 MICBQ29980 383 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 CARD17Q5XLA6 110 aa12.02□□□□□ -0.49
CTDP1-202ENST00000299543 GVQW1Q8N7I0 195 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms