RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 A0A1W2PQ09 198 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 ANXA2P2A6NMY6 339 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 SYNGR4O95473 234 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 APOA1P02647 267 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 MAS1P04201 325 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 ITGB2P05107 769 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 ANXA2P07355 339 aaKnown RBP12.57□□□□□ -0.4
C9orf3-202ENST00000297979 S100A12P80511 92 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 ENDOGQ14249 297 aaKnown RBP12.57□□□□□ -0.4
C9orf3-202ENST00000297979 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 LGALS14Q8TCE9 139 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 MOB1AQ9H8S9 216 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 TBC1D24Q9ULP9 559 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 ZFHX2Q9C0A1 2572 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-202ENST00000297979 ACTL6AO96019 429 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 MRPS34P82930 218 aaKnown RBP12.57□□□□□ -0.4
C9orf3-202ENST00000297979 SCN1BQ07699 218 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 DEFB109BQ30KR1 87 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 OR13C3Q8NGS6 347 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 TMEM45BQ96B21 275 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 PBOV1Q9GZY1 135 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 CSAG2Q9Y5P2 127 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 IGKV3D-15A0A087WSY6 115 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 DOK2O60496 412 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 TTRP02766 147 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 GRB2P62993 217 aaKnown RBP12.57□□□□□ -0.4
C9orf3-202ENST00000297979 IGFL2Q6UWQ7 119 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 Q8N402 240 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 GJC3Q8NFK1 279 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 ZNF837Q96EG3 531 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-202ENST00000297979 MRI1Q9BV20 369 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 CKLFQ9UBR5 152 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
C9orf3-202ENST00000297979 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
C9orf3-202ENST00000297979 LIPGQ9Y5X9 500 aa12.57□□□□□ -0.4
C9orf3-202ENST00000297979 RIF1Q5UIP0 2472 aaKnown RBP12.56□□□□□ -0.4
C9orf3-202ENST00000297979 P2RY10O00398 339 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 FSTP19883 344 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 DNAAF1Q8NEP3 725 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 ALKBH3Q96Q83 286 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-202ENST00000297979 LIN7BQ9HAP6 207 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 DDX28Q9NUL7 540 aaKnown RBP12.56□□□□□ -0.4
C9orf3-202ENST00000297979 NUFIP1Q9UHK0 495 aaKnown RBP12.56□□□□□ -0.4
C9orf3-202ENST00000297979 FOXJ3Q9UPW0 622 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 A0A0G2JMP0 313 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 A0A0X1KG70 313 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 FAM221AA4D161 298 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 ACSM4P0C7M7 580 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 UBE2NLQ5JXB2 153 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 RIPPLY2Q5TAB7 128 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 LRRC18Q8N456 261 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 OR4M2Q8NGB6 313 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 CPT1CQ8TCG5 803 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 KCNJ15Q99712 375 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 DEFB127Q9H1M4 99 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 LDAHQ9H6V9 325 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 EXO5Q9H790 373 aa12.56□□□□□ -0.4
C9orf3-202ENST00000297979 CALCBP10092 127 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 PITPNBP48739 271 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 CX3CR1P49238 355 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 BCAP31P51572 246 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 PRKXP51817 358 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 TAB1Q15750 504 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 RNFT1Q5M7Z0 435 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 FAM27BQ5VT28 67 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 TRIQKQ629K1 86 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 ASPHD2Q6ICH7 369 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 ZDHHC11Q9H8X9 412 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 PCDHGA9Q9Y5G4 932 aaKnown RBP12.55□□□□□ -0.4
C9orf3-202ENST00000297979 CLDN12P56749 244 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 ZNF121P58317 390 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-202ENST00000297979 HIST1H3AP68431 136 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 HIST2H3PS2Q5TEC6 136 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 SEZ6L2Q6UXD5 910 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 HIST2H3AQ71DI3 136 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 ZNF680Q8NEM1 530 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 TMEM38BQ9NVV0 291 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 TAS2R4Q9NYW5 299 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 TINAGQ9UJW2 476 aa12.55□□□□□ -0.4
C9orf3-202ENST00000297979 TRGV5A0A0B4J1U4 118 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 A0A1B0GVC2 190 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 A6NIN4 97 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 TTLL8A6PVC2 850 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 HLA-DQB1P01920 261 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 ASAH1Q13510 395 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 GDPD3Q7L5L3 318 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 LUZP2Q86TE4 346 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 ZNF283Q8N7M2 679 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 FNDC9Q8TBE3 224 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 SEC22CQ9BRL7 303 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 PRRG4Q9BZD6 226 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
C9orf3-202ENST00000297979 SYT7O43581 403 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 MRPL33O75394 65 aaKnown RBP12.54□□□□□ -0.4
C9orf3-202ENST00000297979 IGFBP3P17936 291 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-202ENST00000297979 CTSSP25774 331 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 CFPP27918 469 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 C3AR1Q16581 482 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 PYHIN1Q6K0P9 492 aa12.54□□□□□ -0.4
C9orf3-202ENST00000297979 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms