RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TSFMP43897 325 aaKnown RBP12.14□□□□□ -0.47
HPS3-201ENST00000296051 PLA1AQ53H76 456 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 MOB3CQ70IA8 216 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 MVB12AQ96EY5 273 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 MOKQ9UQ07 419 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 FAM96BQ9Y3D0 163 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 A0A0A6YYD5 115 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 LILRA5A6NI73 299 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 B3GALNT1O75752 331 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 NXPH1P58417 271 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 EXD3Q8N9H8 876 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 C10orf90Q96M02 699 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 LANCL2Q9NS86 450 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 SLC22A7Q9Y694 548 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 LY75O60449 1722 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 NDUFB6O95139 128 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 NXPH3O95157 252 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 THBS1P07996 1170 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 TBXA2RP21731 343 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 CSF2RBP32927 897 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 DRD3P35462 400 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 CRYBA2P53672 197 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 PRSS53Q2L4Q9 553 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 ZNF808Q8N4W9 903 aaPredicted RBP12.14□□□□□ -0.47
HPS3-201ENST00000296051 OR5M9Q8NGP3 310 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 SCMH1Q96GD3 660 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 SLC19A3Q9BZV2 496 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 OR11A1Q9GZK7 315 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 ADGRL4Q9HBW9 690 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 CA10Q9NS85 328 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 A0A0B4J293 547 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 IGHV3-64DA0A0J9YX35 117 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 TRIM77I1YAP6 450 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 ZNF354AO60765 605 aaPredicted RBP12.14□□□□□ -0.47
HPS3-201ENST00000296051 IFNA2P01563 188 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 ANKRD34CP0C6C1 535 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 RAC2P15153 192 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 ALOX5APP20292 161 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 S100PP25815 95 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 AGFG1P52594 562 aaKnown RBP12.14□□□□□ -0.47
HPS3-201ENST00000296051 PRSS41Q7RTY9 318 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 ADGRE4PQ86SQ3 457 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 FJX1Q86VR8 437 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 CBLN2Q8IUK8 224 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 DND1Q8IYX4 353 aaKnown RBP12.14□□□□□ -0.47
HPS3-201ENST00000296051 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.14□□□□□ -0.47
HPS3-201ENST00000296051 SMCO4Q9NRQ5 59 aa12.14□□□□□ -0.47
HPS3-201ENST00000296051 ROS1P08922 2347 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 IGHV1OR21-1A0A087WYE8 117 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 IFNA5P01569 189 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 CELA2BP08218 269 aaPredicted RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 PSMB6P28072 239 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 ZNF93P35789 620 aaPredicted RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 ACSM1Q08AH1 577 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 SOHLH1Q5JUK2 328 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 TSEN54Q7Z6J9 526 aaKnown RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 ADAT1Q9BUB4 502 aaKnown RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 SLCO1C1Q9NYB5 712 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 ELF5Q9UKW6 265 aaPredicted RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 TRAV1-2A0A0B4J238 106 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 H0YIG0 161 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 K7EQS6 105 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 CXCL13O43927 109 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 CNR1P21554 472 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 RPL18Q07020 188 aaKnown RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 BATFQ16520 125 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 NAA40Q86UY6 237 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 BAP18Q8IXM2 172 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 MRPS28Q9Y2Q9 187 aaKnown RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 SMCO3A2RU48 225 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 OR6C68A6NDL8 312 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 TRIM64BA6NI03 449 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 A8MVM7 634 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 SULT1A3P0DMM9 295 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 SULT1A4P0DMN0 295 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 MGMTP16455 207 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 ZXDAP98168 799 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 ZNF770Q6IQ21 691 aaPredicted RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 TMEM65Q6PI78 240 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 OR1S2Q8NGQ3 325 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 CMBLQ96DG6 245 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 RRNAD1Q96FB5 475 aaKnown RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 MRGPRX3Q96LB0 322 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 ARHGDIGQ99819 225 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 SLC25A32Q9H2D1 315 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 DECR2Q9NUI1 292 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 MED19A0JLT2 244 aaPredicted RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 LINC00862A6NCI5 91 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 OTOL1A6NHN0 477 aaPredicted RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 OR2F2O95006 317 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 HRH1P35367 487 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 MFAP5Q13361 173 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 OR2F1Q13607 317 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 FAM53BQ14153 422 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 OR2W3Q7Z3T1 314 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 OR11L1Q8NGX0 322 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 NDRG3Q9UGV2 375 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 OR52A1Q9UKL2 312 aa12.13□□□□□ -0.47
HPS3-201ENST00000296051 TIMM8BQ9Y5J9 83 aaPredicted RBP12.13□□□□□ -0.47
HPS3-201ENST00000296051 TRAV17A0A0B4J275 112 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms