RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 HIST1H3AP68431 136 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 PHYHD1Q5SRE7 291 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 HIST2H3PS2Q5TEC6 136 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 HIST2H3AQ71DI3 136 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 ZNF283Q8N7M2 679 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 OR51A2Q8NGJ7 313 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 NUDT15Q9NV35 164 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 PAIP2BQ9ULR5 123 aaKnown RBP8.06□□□□□ -1.12
PDPN-201ENST00000294489 FLVCR1Q9Y5Y0 555 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 DMXL1Q9Y485 3027 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 CTAG2O75638 210 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 CELA3AP09093 270 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 BDKRB2P30411 391 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 CX3CR1P49238 355 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 STARP49675 285 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 TNFSF10P50591 281 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 RAB25P57735 213 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 ZFP69Q49AA0 526 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 OR51E1Q8TCB6 317 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 GCDHQ92947 438 aaPredicted RBP8.06□□□□□ -1.12
PDPN-201ENST00000294489 ST6GAL2Q96JF0 529 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 SORCS2Q96PQ0 1159 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 ZDHHC11Q9H8X9 412 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 RNF122Q9H9V4 155 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 PNRC2Q9NPJ4 139 aaKnown RBP8.06□□□□□ -1.12
PDPN-201ENST00000294489 CGGBP1Q9UFW8 167 aaPredicted RBP8.06□□□□□ -1.12
PDPN-201ENST00000294489 RBMX2Q9Y388 322 aaKnown RBP8.06□□□□□ -1.12
PDPN-201ENST00000294489 FREM2Q5SZK8 3169 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 AHCTF1Q8WYP5 2266 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 MED12Q93074 2177 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 MT-ND4P03905 459 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 TMIGD3P0DMS9 266 aaPredicted RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 CD37P11049 281 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ZNF20P17024 532 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 GALK2Q01415 458 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ABHD12BQ7Z5M8 362 aaPredicted RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 NABP1Q96AH0 204 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ACTR6Q9GZN1 396 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ATG5Q9H1Y0 275 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 NEK6Q9HC98 313 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 TMEM138Q9NPI0 162 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 KLK11Q9UBX7 282 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 TRAV6A0A075B6T7 132 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 TMEM272A0A1B0GTI8 110 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 LOC390937A0A1W2PQ73 354 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 A8MV72 311 aaPredicted RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 EFSO43281 561 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 LMX1BO60663 402 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 RBBP9O75884 186 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ACTL6AO96019 429 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ERCC1P07992 297 aaPredicted RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 RAB3AP20336 220 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 NTF4P34130 210 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 MAGEA5P43359 124 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 EFNB2P52799 333 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 STK11Q15831 433 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 KCNJ8Q15842 424 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ZNF766Q5HY98 468 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 AAED1Q7RTV5 226 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ADGRE4PQ86SQ3 457 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 LRRC18Q8N456 261 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 FAM109AQ8N4B1 249 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 OR8B12Q8NGG6 310 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 OR1J2Q8NGS2 313 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ROBO4Q8WZ75 1007 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 AKAP1Q92667 903 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDPN-201ENST00000294489 SLC25A28Q96A46 364 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ZNF775Q96BV0 537 aaPredicted RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 MRPL15Q9P015 296 aaKnown RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 KNTC1P50748 2209 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 TRAV18A0A075B6X5 111 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 APOC1P02654 83 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 SLC2A1P11166 492 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 CTSSP25774 331 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 HOXD11P31277 338 aaPredicted RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 MRPS34P82930 218 aaKnown RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 PLA2G7Q13093 441 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ENDOGQ14249 297 aaKnown RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 CCDC92Q53HC0 331 aaPredicted RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 C1orf100Q5SVJ3 147 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 ZNF813Q6ZN06 617 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 GALNTL5Q7Z4T8 443 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 GPR137CQ8N3F9 429 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 OR1M1Q8NGA1 313 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 DEDD2Q8WXF8 326 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 HRASLSQ9HDD0 168 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 PAQR5Q9NXK6 330 aaPredicted RBP8.05□□□□□ -1.12
PDPN-201ENST00000294489 ING3Q9NXR8 418 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 TAS2R8Q9NYW2 309 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 WASF3Q9UPY6 502 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 SLC5A6Q9Y289 635 aa8.05□□□□□ -1.12
PDPN-201ENST00000294489 A0A1B0GTI1 187 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 ANKRD20A5PA0PJZ0 165 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 ZNF24P17028 368 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 FAUP35544 74 aaKnown RBP8.04□□□□□ -1.12
PDPN-201ENST00000294489 CCR6P51684 374 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 RAG2P55895 527 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 RRAS2P62070 204 aaPredicted RBP8.04□□□□□ -1.12
PDPN-201ENST00000294489 CD83Q01151 205 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 NHLH1Q02575 133 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms