RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 DEFB107AQ8IZN7 70 aa21.13■□□□□ 0.97
U2AF1-201ENST00000291552 SIGLECL1Q8N7X8 197 aa21.13■□□□□ 0.97
U2AF1-201ENST00000291552 OR8D4Q8NGM9 314 aa21.13■□□□□ 0.97
U2AF1-201ENST00000291552 DACT3Q96B18 629 aaPredicted RBP21.13■□□□□ 0.97
U2AF1-201ENST00000291552 TMCC3Q9ULS5 477 aa21.13■□□□□ 0.97
U2AF1-201ENST00000291552 LRCH1Q9Y2L9 728 aa21.13■□□□□ 0.97
U2AF1-201ENST00000291552 PPIAL4AQ9Y536 164 aa21.13■□□□□ 0.97
U2AF1-201ENST00000291552 BHLHE40O14503 412 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 CD80P33681 288 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 IFNGR2P38484 337 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 ECH1Q13011 328 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 ZNF181Q2M3W8 571 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 ZNF770Q6IQ21 691 aaPredicted RBP21.12■□□□□ 0.97
U2AF1-201ENST00000291552 KLBQ86Z14 1044 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 BCL6BQ8N143 479 aaPredicted RBP21.12■□□□□ 0.97
U2AF1-201ENST00000291552 CYB561A3Q8NBI2 242 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 OR4C15Q8NGM1 316 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 C1orf147Q96MC9 270 aaPredicted RBP21.12■□□□□ 0.97
U2AF1-201ENST00000291552 TMEM246Q9BRR3 403 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 NUP50Q9UKX7 468 aa21.12■□□□□ 0.97
U2AF1-201ENST00000291552 C5orf63A6NC05 138 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 HLA-DQA2P01906 255 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 FPR2P25090 351 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 GATA4P43694 442 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 PAX8Q06710 450 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 MAB21L1Q13394 359 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 ZNF362Q5T0B9 420 aaPredicted RBP21.11■□□□□ 0.97
U2AF1-201ENST00000291552 DOK3Q7L591 496 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 OR2AJ1Q8NGZ0 328 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 ZNF48Q96MX3 618 aaPredicted RBP21.11■□□□□ 0.97
U2AF1-201ENST00000291552 HCAR1Q9BXC0 346 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 TMEM100Q9NV29 134 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 OR5V1Q9UGF6 321 aa21.11■□□□□ 0.97
U2AF1-201ENST00000291552 TRRAPQ9Y4A5 3859 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 LCATP04180 440 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 RPS2P15880 293 aaKnown RBP21.1■□□□□ 0.97
U2AF1-201ENST00000291552 HMGA2P52926 109 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 RAD23AP54725 363 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 HOXA4Q00056 320 aaPredicted RBP21.1■□□□□ 0.97
U2AF1-201ENST00000291552 ZNF404Q494X3 552 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 CYP2R1Q6VVX0 501 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 PIGWQ7Z7B1 504 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 SSBP3Q9BWW4 388 aaPredicted RBP21.1■□□□□ 0.97
U2AF1-201ENST00000291552 KCNG2Q9UJ96 466 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 ARL2BPQ9Y2Y0 163 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 PKD1L1Q8TDX9 2849 aa21.1■□□□□ 0.97
U2AF1-201ENST00000291552 TVP23AA6NH52 213 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 MAGEA2P43356 314 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 SNAI3Q3KNW1 292 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 C16orf89Q6UX73 402 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 SLCO4A1Q96BD0 722 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 MRI1Q9BV20 369 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 CDADC1Q9BWV3 514 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 NTN4Q9HB63 628 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 DDX28Q9NUL7 540 aaKnown RBP21.09■□□□□ 0.97
U2AF1-201ENST00000291552 VNN3Q9NY84 501 aa21.09■□□□□ 0.97
U2AF1-201ENST00000291552 TCRBV5S2A0A599 114 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 M0R135 149 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 FSTL3O95633 263 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 IGHV4-38-2P0DP08 117 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 OTX1P32242 354 aaPredicted RBP21.08■□□□□ 0.97
U2AF1-201ENST00000291552 CD200P41217 278 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 GNGT1P63211 74 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 PPP1R8Q12972 351 aaKnown RBP21.08■□□□□ 0.97
U2AF1-201ENST00000291552 SPATS1Q496A3 300 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 AWAT1Q58HT5 328 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 PRAMEF6Q5VXH4 476 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 C3orf56Q8N813 242 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 SLC37A3Q8NCC5 494 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 OR52L1Q8NGH7 329 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 OR51L1Q8NGJ5 315 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 Q8TCH9 128 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 ZNF799Q96GE5 643 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 DUX5Q96PT3 197 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 IL20Q9NYY1 176 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 MIOXQ9UGB7 285 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 SOX21Q9Y651 276 aaPredicted RBP21.08■□□□□ 0.97
U2AF1-201ENST00000291552 COMMD3-BMI1R4GMX3 469 aa21.08■□□□□ 0.97
U2AF1-201ENST00000291552 IGHV2-70DA0A0C4DH43 119 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 DNAJC9-AS1A6NH13 148 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 TNFRSF11BO00300 401 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 FAM20BO75063 409 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 KRT36O76013 467 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 TPTEP56180 551 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 MPPED2Q15777 294 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 LYPD2Q6UXB3 125 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 PGAP1Q75T13 922 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 C19orf18Q8NEA5 215 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 PROKR2Q8NFJ6 384 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 OR9Q1Q8NGQ5 310 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 OR2AE1Q8NHA4 323 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 NEIL1Q96FI4 390 aaPredicted RBP21.07■□□□□ 0.96
U2AF1-201ENST00000291552 TRIM15Q9C019 465 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 ACTR3BQ9P1U1 418 aa21.07■□□□□ 0.96
U2AF1-201ENST00000291552 IGHV3OR16-10A0A075B7F0 116 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 GASTP01350 101 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 CPT2P23786 658 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 GNB2P62879 340 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 ZNF92Q03936 586 aa21.06■□□□□ 0.96
U2AF1-201ENST00000291552 MALLQ13021 153 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms