RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RAG2P55895 527 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 LGALSLQ3ZCW2 172 aaPredicted RBP10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 PRAMEF8Q5VWM4 474 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 PRAMEF7Q5VXH5 474 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 WBP2NLQ6ICG8 309 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 ETFRF1Q6IPR1 90 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 RBMS3Q6XE24 437 aaKnown RBP10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 GALNT16Q8N428 558 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 FAM24BQ8N5W8 94 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 CPNE4Q96A23 557 aaPredicted RBP10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 ORAI1Q96D31 301 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 TMEM59Q9BXS4 323 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 ADAM19Q9H013 955 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 GLIPR2Q9H4G4 154 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 CGGBP1Q9UFW8 167 aaPredicted RBP10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 NUP205Q92621 2012 aa10.31□□□□□ -0.76
NPC1L1-201ENST00000289547 A0A087WV62 115 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 IGHV5-51A0A0C4DH38 117 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 PRSS23O95084 383 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 H2AFB1P0C5Y9 115 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 HNF4GQ14541 408 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 JMJD6Q6NYC1 403 aaPredicted RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 TMEM65Q6PI78 240 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 OR1S2Q8NGQ3 325 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 TMEM68Q96MH6 324 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 RSRP1Q9BUV0 290 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 PCDHGA9Q9Y5G4 932 aaKnown RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 PLPP1O14494 284 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 TAAR5O14804 337 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF264O43296 627 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 PRR35P0CG20 571 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 CEACAM1P13688 526 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF273Q14593 569 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 EXOSC6Q5RKV6 272 aaKnown RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 EEF1A1P5Q5VTE0 462 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 TMEM182Q6ZP80 229 aaPredicted RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 OR1L3Q8NH93 324 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 SAP25Q8TEE9 199 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 SGK3Q96BR1 496 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 NXF5Q9H1B4 397 aaKnown RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ANKRD19PQ9H560 264 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 PLEKHB1Q9UF11 243 aaPredicted RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 IGHV3-20A0A0C4DH32 117 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 H7BYZ3 331 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 SPINT1O43278 529 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 FGF7P21781 194 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 FCGR2CP31995 323 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 MVDP53602 400 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 BDH1Q02338 343 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 INSL4Q14641 139 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF628Q5EBL2 1059 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 LIPNQ5VXI9 398 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 FIP1L1Q6UN15 594 aaKnown RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 NHLRC1Q6VVB1 395 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 MSRB3Q8IXL7 192 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 MMP21Q8N119 569 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 APOBEC4Q8WW27 367 aaKnown RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 LHX9Q9NQ69 397 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF230Q9UIE0 474 aaPredicted RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 FAM96BQ9Y3D0 163 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 KLK8O60259 260 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 PJVKQ0ZLH3 352 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF620Q6ZNG0 422 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 DBX2Q6ZNG2 339 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ADGRE4PQ86SQ3 457 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ASB17Q8WXJ9 295 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 MENTQ9BUN1 341 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 MFRPQ9BY79 579 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 SLC39A9Q9NUM3 307 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 MED9Q9NWA0 146 aa10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 ELF5Q9UKW6 265 aaPredicted RBP10.3□□□□□ -0.76
NPC1L1-201ENST00000289547 A0A1W2PPV4 95 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 F5H5K5 113 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 TCAPO15273 167 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 F10P00742 488 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 NAGAP17050 411 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 SELENOPP49908 381 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 P2RX1P51575 399 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 TAF9Q16594 264 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF385BQ569K4 471 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 RPUSD3Q6P087 351 aaKnown RBP10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 LINC00518Q8N0U6 118 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 OR56B1Q8NGI3 324 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 CABLES2Q9BTV7 478 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 HINT2Q9BX68 163 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 CEBPZOSA8MTT3 80 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 QDPRP09417 244 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 PTHLHP12272 177 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 FCGR2AP12318 317 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 FKBP2P26885 142 aaKnown RBP10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 TRHRP34981 398 aaPredicted RBP10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 THBS2P35442 1172 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 DAP3P51398 398 aaKnown RBP10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 SSX7Q7RTT5 188 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 CHAC2Q8WUX2 184 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 P4HTMQ9NXG6 502 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 RALGAPA2Q2PPJ7 1873 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 A6NIZ1 184 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 GNB3P16520 340 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms