RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TM4SF1P30408 202 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 PRDX1Q06830 199 aaKnown RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 TMEM268Q5VZI3 342 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 NTNG1Q9Y2I2 539 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 DOCK11Q5JSL3 2073 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 PIAS2O75928 621 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 RPS19P39019 145 aaKnown RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 PLA2G12AQ9BZM1 189 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 LMAN1LQ9HAT1 526 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SEBOXQ9HB31 216 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 IL17CQ9P0M4 197 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 NAT8BQ9UHF3 227 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 A0A0A6YYJ9 748 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 WDR1O75083 606 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 DEDDO75618 318 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 OR5AL1P0C617 328 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 HTR1DP28221 377 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 HOXA4Q00056 320 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF256Q9Y2P7 627 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ABCA4P78363 2273 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 A0A1B0GUH1 482 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 J3KTA2 159 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SLURP2P0DP57 97 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SCGB1A1P11684 91 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 FABP4P15090 132 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 PTGER1P34995 402 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF385BQ569K4 471 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ANKRD16Q6P6B7 361 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 ZDHHC23Q8IYP9 409 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 LILRB1Q8NHL6 650 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-201ENST00000282516 SLC39A13Q96H72 371 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 TXLNGYQ9BZA5 131 aa7.98□□□□□ -1.13
NIPBL-201ENST00000282516 G3V3Y1 287 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 IAPPP10997 89 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 YPEL5P62699 121 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 SCGB1D4Q6XE38 83 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 RPL3LQ92901 407 aaKnown RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 OR6C1Q96RD1 312 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 TAAR9Q96RI9 348 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 MACROD1Q9BQ69 325 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 UBQLN3Q9H347 655 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 BANF2Q9H503 90 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ADAMTSL4Q6UY14 1074 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 PARS2Q7L3T8 475 aaKnown RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 RHOFQ9HBH0 211 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 BET1LQ9NYM9 111 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 TRGV10A0A0A0MS01 117 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ALX3O95076 343 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 PSMB5P28074 263 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 GP2P55259 537 aaKnown RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 OR4C16Q8NGL9 310 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 AKR7LQ8NHP1 331 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 LRRC37A3O60309 1634 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CNOT1A5YKK6 2376 aaKnown RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 SIRPB1O00241 398 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CDK2AP1O14519 115 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 DAPP51397 102 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ZBTB44Q8NCP5 570 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 TMEM38AQ9H6F2 299 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 LYRM4Q9HD34 91 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ASIC5Q9NY37 505 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CGGBP1Q9UFW8 167 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 SPTAN1Q13813 2472 aaKnown RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 AKAP11Q9UKA4 1901 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CEBPBP17676 345 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 KIR2DS2P43631 304 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 VMA21Q3ZAQ7 101 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 LAIR1Q6GTX8 287 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 LINC00299Q6ZSB3 139 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 UBALD1Q8TB05 177 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 OR10C1Q96KK4 312 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 C1QTNF3Q9BXJ4 246 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 PROCRQ9UNN8 238 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 UFC1Q9Y3C8 167 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ATP23Q9Y6H3 246 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 FER1L5A0AVI2 2057 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 MYO7BQ6PIF6 2116 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 A0A1B0GX78 115 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ANKRD61A6NGH8 418 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 MS4A18H0YCH9 400 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 H0YIV9 168 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 LRP3O75074 770 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CTSAP10619 480 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 GLRA1P23415 457 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CD68P34810 354 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 GALR1P47211 349 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 SRP9P49458 86 aaKnown RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 PITX1P78337 314 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 MS4A18Q3C1V0 323 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 Q3ZCU0 254 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 LRRC10Q5BKY1 277 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 OR5AS1Q8N127 324 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 SLCO4A1Q96BD0 722 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CST2P09228 141 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 HRH1P35367 487 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 RPL27P61353 136 aaKnown RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 SOWAHCQ53LP3 525 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms