RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 HIST3H3Q16695 136 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 MOGAT2Q3SYC2 334 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 OR5D18Q8NGL1 313 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 PGAM5Q96HS1 289 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 SLC6A15Q9H2J7 730 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 CNTD2Q9H8S5 307 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 PLEKHA1Q9HB21 404 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 FCN2Q15485 313 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 H3F3CQ6NXT2 135 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 AAED1Q7RTV5 226 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 EGFL6Q8IUX8 553 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 SULF2Q8IWU5 870 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 CLEC1AQ8NC01 280 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF486Q96H40 463 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-201ENST00000279247 GPR87Q9BY21 358 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 XRCC3O43542 346 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 VAMP5O95183 116 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 FTH1P19P0C7X4 201 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF17P17021 662 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 RRAS2P62070 204 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-201ENST00000279247 FOXO1Q12778 655 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 ANKRD16Q6P6B7 361 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 OR4D10Q8NGI6 311 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 MS4A3Q96HJ5 214 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 MED28Q9H204 178 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 NELFAQ9H3P2 528 aa15.82■□□□□ 0.12
CAPN1-201ENST00000279247 PNRC2Q9NPJ4 139 aaKnown RBP15.82■□□□□ 0.12
CAPN1-201ENST00000279247 ACOT7O00154 380 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 H2AFB2P0C5Z0 115 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 IGFBP3P17936 291 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-201ENST00000279247 CSRP1P21291 193 aaKnown RBP15.81■□□□□ 0.12
CAPN1-201ENST00000279247 CNR1P21554 472 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 BDKRB2P30411 391 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 MNDAP41218 407 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 VEGFCP49767 419 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 SF3B4Q15427 424 aaKnown RBP eCLIP15.81■□□□□ 0.121e-7■■■■■ 31.6
CAPN1-201ENST00000279247 TMPRSS7Q7RTY8 843 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 TMEM123Q8N131 208 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 OR2M7Q8NG81 312 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 GIMAP1Q8WWP7 306 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 AKAP1Q92667 903 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■■■□□ 18.5
CAPN1-201ENST00000279247 THRSPQ92748 146 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 BOKQ9UMX3 212 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-201ENST00000279247 FLVCR1Q9Y5Y0 555 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 CEP295Q9C0D2 2601 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 GSTZ1O43708 216 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-201ENST00000279247 ISG15P05161 165 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 CHST4Q8NCG5 386 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 OR2V1Q8NHB1 315 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 KIAA1549Q9HCM3 1950 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 C21orf140B9A014 251 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 ARPC1BO15143 372 aaKnown RBP15.81■□□□□ 0.12
CAPN1-201ENST00000279247 RBBP9O75884 186 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 CSN2P05814 226 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 ENDOGQ14249 297 aaKnown RBP15.81■□□□□ 0.12
CAPN1-201ENST00000279247 ARMC10Q8N2F6 343 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 MRI1Q9BV20 369 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 C20orf85Q9H1P6 137 aa15.81■□□□□ 0.12
CAPN1-201ENST00000279247 A0A1B0GTI1 187 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 CTDSPLO15194 276 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 HCKP08631 526 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 HLA-DMAP28067 261 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 EIF3IQ13347 325 aaKnown RBP15.8■□□□□ 0.12
CAPN1-201ENST00000279247 SFRP5Q5T4F7 317 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 SLC25A25Q6KCM7 469 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 RTN4RL2Q86UN3 420 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF101Q8IZC7 436 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 OR1M1Q8NGA1 313 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 SLC25A28Q96A46 364 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 FBXO17Q96EF6 278 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 CYYR1Q96J86 154 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 CMTM3Q96MX0 182 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 SSNA1O43805 119 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 GTF2F2P13984 249 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF84P51523 738 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 LINC00303Q3SY05 128 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 NAXEQ8NCW5 288 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 OR6M1Q8NGM8 313 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 AKR7LQ8NHP1 331 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 GPER1Q99527 375 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 NUBP2Q9Y5Y2 271 aa15.8■□□□□ 0.12
CAPN1-201ENST00000279247 LOC102725191A0A1B0GVB3 256 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 TMEM235A6NFC5 223 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 RAB3AP20336 220 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 PMPCAQ10713 525 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 AWAT2Q6E213 333 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 DTX1Q86Y01 620 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 GPR137CQ8N3F9 429 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 OR5D14Q8NGL3 314 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 OR2AE1Q8NHA4 323 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 ABI3Q9P2A4 366 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 CHMP1BQ7LBR1 199 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 PIP4P1Q86T03 277 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 ANGPTL5Q86XS5 388 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 GJC3Q8NFK1 279 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 KCNE4Q8WWG9 221 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 NABP1Q96AH0 204 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 TMEM138Q9NPI0 162 aa15.79■□□□□ 0.12
CAPN1-201ENST00000279247 PRSS3P35030 304 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 SNRPD2P62316 118 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms