RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ST7LQ8TDW4 575 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 DUSP19Q8WTR2 217 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-201ENST00000277198 ASB10Q8WXI3 467 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 AQP3Q92482 292 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 FAHD2AQ96GK7 314 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 SHARPINQ9H0F6 387 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 DHCR7Q9UBM7 475 aaKnown RBP11.51□□□□□ -0.57
C9orf3-201ENST00000277198 GPN3Q9UHW5 284 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-201ENST00000277198 EMC9Q9Y3B6 208 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 AHCTF1Q8WYP5 2266 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 TMEM269A0A1B0GVZ9 245 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 LOC107986453A0A1B0GWG9 222 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 A0A1B0GX78 115 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ANKUB1A6NFN9 424 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 H3BSH0 61 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF208O43345 1280 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 GMFGO60234 142 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 AMY2AP04746 511 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 UBBP0CG47 229 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 SLC25A4P12235 298 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 PNLIPP16233 465 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 TBPP20226 339 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 RPS27AP62979 156 aaKnown RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 UBA52P62987 128 aaKnown RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ZFP36L1Q07352 338 aaKnown RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 C17orf67Q0P5P2 114 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 H1FNTQ75WM6 255 aaPredicted RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 OR5M8Q8NGP6 311 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 OR1L3Q8NH93 324 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 RNF133Q8WVZ7 376 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 DVL3Q92997 716 aaPredicted RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 PMEPA1Q969W9 287 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 PPP1R14AQ96A00 147 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 CMKLR1Q99788 373 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 UQCC2Q9BRT2 126 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 VN1R1Q9GZP7 353 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 CHST6Q9GZX3 395 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 FBLN5Q9UBX5 448 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 IGHV5-10-1A0A0J9YXX1 117 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 MEIS3P1A6NDR6 274 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 NPIPA5E9PKD4 350 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 MS4A18H0YCH9 400 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ADAM10O14672 748 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 SCO1O75880 301 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 OR2F2O95006 317 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 CD96P40200 585 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 EIF2S3P41091 472 aaKnown RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 EFNA3P52797 238 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 SORDQ00796 357 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 OC90Q02509 493 aaPredicted RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 OR2F1Q13607 317 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 MS4A18Q3C1V0 323 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 VWA2Q5GFL6 755 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 LY6G6FQ5SQ64 297 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ATPAF1Q5TC12 328 aaPredicted RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 PAPD4Q6PIY7 484 aaKnown RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 LRFN4Q6PJG9 635 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 DCXRQ7Z4W1 244 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF584Q8IVC4 421 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 BEST3Q8N1M1 668 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 BPIFB2Q8N4F0 458 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 ZDHHC22Q8N966 263 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 BVESQ8NE79 360 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 COQ8AQ8NI60 647 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 LHFPL5Q8TAF8 219 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 NPIPA1Q9UND3 350 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 RHBDD3Q9Y3P4 386 aa11.5□□□□□ -0.57
C9orf3-201ENST00000277198 MPDZO75970 2070 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 PTPRQQ9UMZ3 2332 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 ETV2O00321 342 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-201ENST00000277198 DUX1O43812 170 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 RAD1O60671 282 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 TNFSF15O95150 251 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 CCL4P13236 92 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 POU3F2P20265 443 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-201ENST00000277198 BDKRB2P30411 391 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 DHRS2Q13268 280 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 RAB11FIP2Q7L804 512 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF546Q86UE3 836 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-201ENST00000277198 GALNT16Q8N428 558 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 JAGN1Q8N5M9 183 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 PHYHIPLQ96FC7 376 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 CCDC74BQ96LY2 380 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 FOXN4Q96NZ1 517 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 OR11A1Q9GZK7 315 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 TINAGL1Q9GZM7 467 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-201ENST00000277198 TGIF2Q9GZN2 237 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 KCNK15Q9H427 330 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 CGGBP1Q9UFW8 167 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-201ENST00000277198 GDF2Q9UK05 429 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-201ENST00000277198 MKL2Q9ULH7 1088 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 B3GALT5Q9Y2C3 310 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 LOXL2Q9Y4K0 774 aa11.49□□□□□ -0.57
C9orf3-201ENST00000277198 ATMQ13315 3056 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms