RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 OR14L1PQ8NHC6 308 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 IGSF8Q969P0 613 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 PGAM5Q96HS1 289 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 GINS3Q9BRX5 216 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 COMMD4Q9H0A8 199 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 SERGEFQ9UGK8 458 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 CASP8AP2Q9UKL3 1982 aa8.28□□□□□ -1.08
PDGFC-201ENST00000274071 UNC119BA6NIH7 251 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 PRRT4C9JH25 899 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 SAP18O00422 153 aaKnown RBP8.27□□□□□ -1.09
PDGFC-201ENST00000274071 FRS3O43559 492 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 TDGF1P13385 188 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 CEACAM1P13688 526 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 KLK2P20151 261 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 BCKDHBP21953 392 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 GRK4P32298 578 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 TAS2R50P59544 299 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 RPS13P62277 151 aaKnown RBP8.27□□□□□ -1.09
PDGFC-201ENST00000274071 HSF1Q00613 529 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 PMS2P11Q13670 270 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 ELOCQ15369 112 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 TMPRSS7Q7RTY8 843 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 ORAOV1Q8WV07 137 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 CDS1Q92903 461 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 HIST1H2AAQ96QV6 131 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 PBDC1Q9BVG4 233 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 DPEP2Q9H4A9 486 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 WSB2Q9NYS7 404 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-201ENST00000274071 A0A087WV48 116 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 XKRY2A2RUG3 117 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 H0YIV9 168 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 IFNL4K9M1U5 179 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 M0QZQ0 153 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 LEFTY2O00292 366 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 XKRYO14609 159 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 HSD17B6O14756 317 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 AHSA1O95433 338 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 GYPBP06028 91 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 GIMD1P0DJR0 217 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF28P17035 718 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 CSRP1P21291 193 aaKnown RBP8.27□□□□□ -1.09
PDGFC-201ENST00000274071 SLC25A1P53007 311 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 FAM3AP98173 230 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 COL10A1Q03692 680 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 SSBP1Q04837 148 aaKnown RBP8.27□□□□□ -1.09
PDGFC-201ENST00000274071 CRMP1Q14194 572 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 NFATC4Q14934 902 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 HIKESHIQ53FT3 197 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 SLC25A26Q70HW3 274 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 S100A7AQ86SG5 101 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 TMPRSS12Q86WS5 348 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 OR13C9Q8NGT0 318 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 SKA2Q8WVK7 121 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-201ENST00000274071 MRGPRFQ96AM1 343 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 CMBLQ96DG6 245 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 ADAD1Q96M93 576 aaKnown RBP8.27□□□□□ -1.09
PDGFC-201ENST00000274071 SLC12A9Q9BXP2 914 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 CDH20Q9HBT6 801 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 MYNNQ9NPC7 610 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 FKBP11Q9NYL4 201 aa8.27□□□□□ -1.09
PDGFC-201ENST00000274071 A0A1B0GV50 99 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 TLCD2A6NGC4 264 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 A6NIZ1 184 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 DUS4LO95620 317 aaKnown RBP8.26□□□□□ -1.09
PDGFC-201ENST00000274071 DANCRP0C864 163 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 AKR1C4P17516 323 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 FUT3P21217 361 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 RABIFP47224 123 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 FXYD6P3P58550 94 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 FAM71E1Q6IPT2 247 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 COMMD6Q7Z4G1 85 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 RTN4RL1Q86UN2 441 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-201ENST00000274071 ADAD2Q8NCV1 583 aaKnown RBP8.26□□□□□ -1.09
PDGFC-201ENST00000274071 NOXO1Q8NFA2 376 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 OSGIN2Q9Y236 505 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 INSIG1O15503 277 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 P2RX6O15547 441 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 C1QL1O75973 258 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 FUT1P19526 365 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 FBXO42Q6P3S6 717 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 NUP54Q7Z3B4 507 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 OR51D1Q8NGF3 324 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM18Q96B42 140 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 MRGPRX1Q96LB2 322 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 DPH1Q9BZG8 443 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 PCBD2Q9H0N5 130 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 ARV1Q9H2C2 271 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 OR52D1Q9H346 318 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 PDFQ9HBH1 243 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 PDE7BQ9NP56 450 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 TAAR2Q9P1P5 351 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 APOBEC3BQ9UH17 382 aaKnown RBP8.26□□□□□ -1.09
PDGFC-201ENST00000274071 MSRAQ9UJ68 235 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 WDR45Q9Y484 360 aa8.26□□□□□ -1.09
PDGFC-201ENST00000274071 MTCL1Q9Y4B5 1905 aaKnown RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 MED19A0JLT2 244 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 AHRRA9YTQ3 701 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF736B4DX44 427 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 BHLHE40O14503 412 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 JTBO76095 146 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms